Clone BO33186 Report

Search the DGRC for BO33186

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:331
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG15400-RB
Protein status:BO33186.pep: Imported from assembly
Sequenced Size:1084

Clone Sequence Records

BO33186.complete Sequence

1084 bp assembled on 2012-08-22

GenBank Submission: KX798915

> BO33186.complete
GAAGTTATCAGTCGACATGGAGTCGATAGTGCACATTCTTTCGGATGCGT
ACCATACAACGCTCACGCGGGAGCTTTTCATCAACGAATGGGCTCAGGAA
CGCTTGAGTTTTGGAAGGCCCCTTTGGCATTTTCTCAGCGTTCATTTGGA
GCCAAACAAAATGTTCAACATCATTATCCCCCTATGTGGTATCTTCAGTC
AGGAAATCCTCGTGCATCTCTTCACGGCATTTACCCTGATTAGCACACTG
AACTCCTTCGAAAAATGGATATATCCGGAGACGCGTCCTTTGTGGTTTCT
GCGAGAGCAGTTTGCCAATAATGTGGTTGTAAAGAAACCGGCGGTGGCCT
TGGAAAGTCATCAGCTGAGCTGCGAGATGACCGGTGGGCTGCCCTGCGCC
CACTCAATGACCTTCACGGTGTTCGTACTCATCCTGGCCTCGTTCTTCTT
CGTTCACTGCTGGGATCGCTTTGCTGCGTTGCGCTCTTCCTTCTGCCGCT
GCATAATGTACCTGCTGATCATTGGAATGGTGGTCTGTATGTGGCTGAGT
CGCCTCTACCTGGCCACCGAGTTTCTGCACCAGTGCATACTGGGAAGTTA
CCTGGGAATTAGGTCTCTTTGCACCTTTGAGGGAAATGTGAAGTACTTGT
TCTCGCGACCACGTCGCTATGCGGTCTCAGCTGTTTTCTTCTTGGGAGGA
TTGGCATTGTCAGTGTACTATGTGAAGCTGGAACTGAATATCGATCCCCA
TTGGTCGGTGCGAGAGGCATTTAAATGGTGTCCAGAACCCACATATTTGC
GTCATGAAGTTGGTCCAATCTTTGCACTTGTCAGAGATCTGGGAAATCTA
ATGGGATTGGCTTTGGCCTCGCCACTATATAAGCTGGAAATGAAACAATC
ATCATTTTGGCGGCGATGCCGATTCCTTGGAGTTCTGGAGTTTGTCAACT
ATGGATTGCGCTTTTCCACGTTTAAGCAGTCTGGTCGCTTCGTTTTCTTG
ACCTATGAGTTCTTAAGAAATGTCATTCATTCCCTAGTACTGATTAAGTA
CGTATCGAAATTTTACGCAAGCTTTCTAGACCAT

BO33186.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:20:45
Subject Length Description Subject Range Query Range Score Percent Strand
G6P-RB 1053 CG15400-PB 1..1050 17..1066 5250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:20:46
Subject Length Description Subject Range Query Range Score Percent Strand
G6P-RB 1194 CG15400-RB 72..1121 17..1066 5250 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2814806..2815306 767..267 2505 100 Minus
2L 23513712 2L 2814409..2814589 1066..886 905 100 Minus
2L 23513712 2L 2815379..2815545 268..102 835 100 Minus
2L 23513712 2L 2814637..2814758 886..765 610 100 Minus
2L 23513712 2L 2815604..2815689 102..17 430 100 Minus
Blast to na_te.dros performed on 2014-11-28 12:20:44 has no hits.

BO33186.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:13 Download gff for BO33186.complete
Subject Subject Range Query Range Percent Splice Strand
CG15400-RB 72..1121 17..1068 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:53 Download gff for BO33186.complete
Subject Subject Range Query Range Percent Splice Strand
CG15400-RB 72..1121 17..1068 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:16 Download gff for BO33186.complete
Subject Subject Range Query Range Percent Splice Strand
G6P-RB 72..1121 17..1068 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:16 Download gff for BO33186.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2814407..2814589 886..1068 98 <- Minus
2L 2814638..2814756 767..885 100 <- Minus
2L 2814807..2815305 268..766 100 <- Minus
2L 2815380..2815544 103..267 100 <- Minus
2L 2815604..2815689 17..102 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:53 Download gff for BO33186.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2814407..2814589 886..1068 98 <- Minus
arm_2L 2814638..2814756 767..885 100 <- Minus
arm_2L 2814807..2815305 268..766 100 <- Minus
arm_2L 2815380..2815544 103..267 100 <- Minus
arm_2L 2815604..2815689 17..102 100   Minus

BO33186.pep Sequence

Translation from 16 to 1084

> BO33186.pep
MESIVHILSDAYHTTLTRELFINEWAQERLSFGRPLWHFLSVHLEPNKMF
NIIIPLCGIFSQEILVHLFTAFTLISTLNSFEKWIYPETRPLWFLREQFA
NNVVVKKPAVALESHQLSCEMTGGLPCAHSMTFTVFVLILASFFFVHCWD
RFAALRSSFCRCIMYLLIIGMVVCMWLSRLYLATEFLHQCILGSYLGIRS
LCTFEGNVKYLFSRPRRYAVSAVFFLGGLALSVYYVKLELNIDPHWSVRE
AFKWCPEPTYLRHEVGPIFALVRDLGNLMGLALASPLYKLEMKQSSFWRR
CRFLGVLEFVNYGLRFSTFKQSGRFVFLTYEFLRNVIHSLVLIKYVSKFY
ASFLDH

BO33186.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:37
Subject Length Description Subject Range Query Range Score Percent Strand
G6P-PB 350 CG15400-PB 1..350 1..350 1863 100 Plus