Clone BO33194 Report

Search the DGRC for BO33194

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:331
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptPtp61F-RA
Protein status:BO33194.pep: Imported from assembly
Sequenced Size:1678

Clone Sequence Records

BO33194.complete Sequence

1678 bp assembled on 2012-09-19

GenBank Submission: KX799920

> BO33194.complete
GAAGTTATCAGTCGACATGAGCGAGCAGAAAACGAGTGGGAGTGGGTCGG
CGGCCGCTGCCCGTCTGCAAATCGAGGCGGAGTACAAGGACAAGGGGCCG
CAATGGCATCGCTTCTACAAGGAAATTTGTGAGACCTGCGACCGGGAGGC
GAAGGAGAAGCAGTTCAGCACCTCGGAATCGGAACGCCACACGAACCGCG
GCCTGAATCGCTATCGGGATGTGAATCCGTACGATCATTCCCGCATTGTT
TTGAAGCGCGGCAGCGTAGACTACATCAATGCGAACCTGGTTCAGCTGGA
GCGCGCCGAGCGCCAGTACATCCTGACCCAAGGACCGCTGGTGGACACAG
TGGGCCACTTCTGGCTGATGGTATGGGAGCAGAAGTCCAGAGCAGTTCTC
ATGCTCAACAAGCTGATGGAGAAGAAACAGATCAAGTGCCACCTCTACTG
GCCCAACGAGATGGGAGCCGACAAGGCCCTGAAACTGCCCCACGTCAAAC
TCACCGTGGAGCTCGTCCGTCTCGAGACCTACCAGAACTTTGTGCGGCGA
TGGTTCAAATTAACCGATCTCGAAACGCAGCAGAGTCGTGAAGTGATGCA
GTTCCACTACACCACATGGCCGGACTTTGGCATTCCCAGCTCGCCGAACG
CATTCCTTAAGTTCTTGCAGCAGGTTCGCGACTCCGGCTGCCTCAGCCGC
GACGTGGGTCCAGCCGTAGTGCACTGCAGTGCCGGAATCGGGCGGTCGGG
CACCTTCTGCCTGGTGGACTGTTGCCTGGTACTTATCGACAAGTACGGAG
AGTGCAATGTGTCCAAGGTGCTCTGCGAGCTGCGCAGCTACCGCATGGGC
CTCATACAGACCGCCGACCAGCTGGACTTCTCCTACCAGGCGATCATCGA
GGGCATTAAAAAGCTGCACGATCCCACCTTTCTTGACGCTGAAGAACCCC
TCATTAGCAACGACACAGAGACTCACACACTGGATGAGCTGCCGCCGCCA
TTGCCCCCACGCGTCCAATCGCTTAATCTGCCACTGGCCCCCAATTCCGG
CGGTATACTTTCGCTCAATATGCGCGCGGCCCAGGCTAATGGAGCTGAAA
GTATCGGCAAAGAGCTGAGCAAGGACGCCCTGAACAACTTCATTAATCAG
CACGACATGATCCACGATGCCGAGGTGGCCGACAGTCGTCCCTTGCCGCC
ATTACCCGTAAGGGCTTTCAACGATTCGGACAGCGATGAGGATTACTTGC
TGGATGACGATGACGAGGACGACACCGATGAGGATGAGGAGTACGAGACC
ATTAACGAGCACGATGCCGATCCAGTTAATGGACACGTGCCCGCGACAAC
ACAGCCACATGCCGACGATGTTAATGCCAACAACGAGAAGCCAGCGGTGC
CAGTCGACGAGCAGCACAAGGCGAACGGCATCGATCCAATTCCAGGCCAG
CTCCCAGCCAGTCCCGAGAACGAGCTGAAGCGGCGAAAACGCAACGAATA
CCAGGCCAGCCTGGAGCAGAAGGTCAACGACATGAAGCGGAAGCAGCGGG
AGAACGAGGACAAACAGCTGGCGGCAAAGAAACGAAGGTCATTACTCACA
TATATTGCCGCTGGTGTTGTGGTGGGCGTGATCTGCGCCTACGCATACAC
GAAGCTAGGTGCAAGCTTTCTAGACCAT

BO33194.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:03:19
Subject Length Description Subject Range Query Range Score Percent Strand
Ptp61F-RA 1647 CG9181-PA 1..1644 17..1660 8220 100 Plus
Ptp61F-RB 1608 CG9181-PB 1..1572 17..1588 7860 100 Plus
Ptp61F-RC 1593 CG9181-PC 88..1557 119..1588 7350 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
Ptp61F-RA 2115 CG9181-RA 124..1767 17..1660 8220 100 Plus
Ptp61F-RB 1835 CG9181-RB 124..1695 17..1588 7860 100 Plus
Ptp61F-RE 5167 CG9181-RE 2016..3555 121..1660 7700 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:03:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1344626..1345161 1461..926 2680 100 Minus
3L 28110227 3L 1345498..1345864 925..559 1835 100 Minus
3L 28110227 3L 1345943..1346207 558..294 1325 100 Minus
3L 28110227 3L 1344331..1344532 1660..1459 1010 100 Minus
3L 28110227 3L 1346273..1346452 299..120 885 99.4 Minus
3L 28110227 3L 1350366..1350476 127..17 540 99.1 Minus
Blast to na_te.dros performed on 2014-11-28 12:03:18 has no hits.

BO33194.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-19 11:11:50 Download gff for BO33194.complete
Subject Subject Range Query Range Percent Splice Strand
Ptp61F-RA 190..1833 17..1662 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:20 Download gff for BO33194.complete
Subject Subject Range Query Range Percent Splice Strand
Ptp61F-RA 124..1767 17..1662 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:11 Download gff for BO33194.complete
Subject Subject Range Query Range Percent Splice Strand
Ptp61F-RA 124..1767 17..1662 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:11 Download gff for BO33194.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1350372..1350476 17..121 100   Minus
3L 1345943..1346205 296..558 100 <- Minus
3L 1344329..1344529 1462..1662 99 <- Minus
3L 1344626..1345161 926..1461 100 <- Minus
3L 1345498..1345864 559..925 100 <- Minus
3L 1346277..1346450 122..295 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:20 Download gff for BO33194.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1344329..1344529 1462..1662 99 <- Minus
arm_3L 1344626..1345161 926..1461 100 <- Minus
arm_3L 1345498..1345864 559..925 100 <- Minus
arm_3L 1345943..1346205 296..558 100 <- Minus
arm_3L 1346277..1346450 122..295 100 <- Minus
arm_3L 1350372..1350476 17..121 100   Minus

BO33194.pep Sequence

Translation from 16 to 1678

> BO33194.pep
MSEQKTSGSGSAAAARLQIEAEYKDKGPQWHRFYKEICETCDREAKEKQF
STSESERHTNRGLNRYRDVNPYDHSRIVLKRGSVDYINANLVQLERAERQ
YILTQGPLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWPNEMG
ADKALKLPHVKLTVELVRLETYQNFVRRWFKLTDLETQQSREVMQFHYTT
WPDFGIPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCLV
DCCLVLIDKYGECNVSKVLCELRSYRMGLIQTADQLDFSYQAIIEGIKKL
HDPTFLDAEEPLISNDTETHTLDELPPPLPPRVQSLNLPLAPNSGGILSL
NMRAAQANGAESIGKELSKDALNNFINQHDMIHDAEVADSRPLPPLPVRA
FNDSDSDEDYLLDDDDEDDTDEDEEYETINEHDADPVNGHVPATTQPHAD
DVNANNEKPAVPVDEQHKANGIDPIPGQLPASPENELKRRKRNEYQASLE
QKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVGVICAYAYTKLGAS
FLDH

BO33194.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:25
Subject Length Description Subject Range Query Range Score Percent Strand
Ptp61F-PA 548 CG9181-PA 1..548 1..548 2897 100 Plus
Ptp61F-PB 535 CG9181-PB 1..524 1..524 2778 100 Plus
Ptp61F-PC 530 CG9181-PC 29..519 34..524 2601 99.8 Plus
Ptp61F-PE 431 CG9181-PE 1..431 118..548 2277 100 Plus
Ptp61F-PD 431 CG9181-PD 1..431 118..548 2277 100 Plus