BO33194.complete Sequence
1678 bp assembled on 2012-09-19
GenBank Submission: KX799920
> BO33194.complete
GAAGTTATCAGTCGACATGAGCGAGCAGAAAACGAGTGGGAGTGGGTCGG
CGGCCGCTGCCCGTCTGCAAATCGAGGCGGAGTACAAGGACAAGGGGCCG
CAATGGCATCGCTTCTACAAGGAAATTTGTGAGACCTGCGACCGGGAGGC
GAAGGAGAAGCAGTTCAGCACCTCGGAATCGGAACGCCACACGAACCGCG
GCCTGAATCGCTATCGGGATGTGAATCCGTACGATCATTCCCGCATTGTT
TTGAAGCGCGGCAGCGTAGACTACATCAATGCGAACCTGGTTCAGCTGGA
GCGCGCCGAGCGCCAGTACATCCTGACCCAAGGACCGCTGGTGGACACAG
TGGGCCACTTCTGGCTGATGGTATGGGAGCAGAAGTCCAGAGCAGTTCTC
ATGCTCAACAAGCTGATGGAGAAGAAACAGATCAAGTGCCACCTCTACTG
GCCCAACGAGATGGGAGCCGACAAGGCCCTGAAACTGCCCCACGTCAAAC
TCACCGTGGAGCTCGTCCGTCTCGAGACCTACCAGAACTTTGTGCGGCGA
TGGTTCAAATTAACCGATCTCGAAACGCAGCAGAGTCGTGAAGTGATGCA
GTTCCACTACACCACATGGCCGGACTTTGGCATTCCCAGCTCGCCGAACG
CATTCCTTAAGTTCTTGCAGCAGGTTCGCGACTCCGGCTGCCTCAGCCGC
GACGTGGGTCCAGCCGTAGTGCACTGCAGTGCCGGAATCGGGCGGTCGGG
CACCTTCTGCCTGGTGGACTGTTGCCTGGTACTTATCGACAAGTACGGAG
AGTGCAATGTGTCCAAGGTGCTCTGCGAGCTGCGCAGCTACCGCATGGGC
CTCATACAGACCGCCGACCAGCTGGACTTCTCCTACCAGGCGATCATCGA
GGGCATTAAAAAGCTGCACGATCCCACCTTTCTTGACGCTGAAGAACCCC
TCATTAGCAACGACACAGAGACTCACACACTGGATGAGCTGCCGCCGCCA
TTGCCCCCACGCGTCCAATCGCTTAATCTGCCACTGGCCCCCAATTCCGG
CGGTATACTTTCGCTCAATATGCGCGCGGCCCAGGCTAATGGAGCTGAAA
GTATCGGCAAAGAGCTGAGCAAGGACGCCCTGAACAACTTCATTAATCAG
CACGACATGATCCACGATGCCGAGGTGGCCGACAGTCGTCCCTTGCCGCC
ATTACCCGTAAGGGCTTTCAACGATTCGGACAGCGATGAGGATTACTTGC
TGGATGACGATGACGAGGACGACACCGATGAGGATGAGGAGTACGAGACC
ATTAACGAGCACGATGCCGATCCAGTTAATGGACACGTGCCCGCGACAAC
ACAGCCACATGCCGACGATGTTAATGCCAACAACGAGAAGCCAGCGGTGC
CAGTCGACGAGCAGCACAAGGCGAACGGCATCGATCCAATTCCAGGCCAG
CTCCCAGCCAGTCCCGAGAACGAGCTGAAGCGGCGAAAACGCAACGAATA
CCAGGCCAGCCTGGAGCAGAAGGTCAACGACATGAAGCGGAAGCAGCGGG
AGAACGAGGACAAACAGCTGGCGGCAAAGAAACGAAGGTCATTACTCACA
TATATTGCCGCTGGTGTTGTGGTGGGCGTGATCTGCGCCTACGCATACAC
GAAGCTAGGTGCAAGCTTTCTAGACCAT
BO33194.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:03:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ptp61F-RA | 1647 | CG9181-PA | 1..1644 | 17..1660 | 8220 | 100 | Plus |
Ptp61F-RB | 1608 | CG9181-PB | 1..1572 | 17..1588 | 7860 | 100 | Plus |
Ptp61F-RC | 1593 | CG9181-PC | 88..1557 | 119..1588 | 7350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:03:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ptp61F-RA | 2115 | CG9181-RA | 124..1767 | 17..1660 | 8220 | 100 | Plus |
Ptp61F-RB | 1835 | CG9181-RB | 124..1695 | 17..1588 | 7860 | 100 | Plus |
Ptp61F-RE | 5167 | CG9181-RE | 2016..3555 | 121..1660 | 7700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:03:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1344626..1345161 | 1461..926 | 2680 | 100 | Minus |
3L | 28110227 | 3L | 1345498..1345864 | 925..559 | 1835 | 100 | Minus |
3L | 28110227 | 3L | 1345943..1346207 | 558..294 | 1325 | 100 | Minus |
3L | 28110227 | 3L | 1344331..1344532 | 1660..1459 | 1010 | 100 | Minus |
3L | 28110227 | 3L | 1346273..1346452 | 299..120 | 885 | 99.4 | Minus |
3L | 28110227 | 3L | 1350366..1350476 | 127..17 | 540 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:03:18 has no hits.
BO33194.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-19 11:11:50 Download gff for
BO33194.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ptp61F-RA | 190..1833 | 17..1662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:20 Download gff for
BO33194.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ptp61F-RA | 124..1767 | 17..1662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:11 Download gff for
BO33194.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ptp61F-RA | 124..1767 | 17..1662 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:11 Download gff for
BO33194.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1350372..1350476 | 17..121 | 100 | | Minus |
3L | 1345943..1346205 | 296..558 | 100 | <- | Minus |
3L | 1344329..1344529 | 1462..1662 | 99 | <- | Minus |
3L | 1344626..1345161 | 926..1461 | 100 | <- | Minus |
3L | 1345498..1345864 | 559..925 | 100 | <- | Minus |
3L | 1346277..1346450 | 122..295 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:20 Download gff for
BO33194.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1344329..1344529 | 1462..1662 | 99 | <- | Minus |
arm_3L | 1344626..1345161 | 926..1461 | 100 | <- | Minus |
arm_3L | 1345498..1345864 | 559..925 | 100 | <- | Minus |
arm_3L | 1345943..1346205 | 296..558 | 100 | <- | Minus |
arm_3L | 1346277..1346450 | 122..295 | 100 | <- | Minus |
arm_3L | 1350372..1350476 | 17..121 | 100 | | Minus |
BO33194.pep Sequence
Translation from 16 to 1678
> BO33194.pep
MSEQKTSGSGSAAAARLQIEAEYKDKGPQWHRFYKEICETCDREAKEKQF
STSESERHTNRGLNRYRDVNPYDHSRIVLKRGSVDYINANLVQLERAERQ
YILTQGPLVDTVGHFWLMVWEQKSRAVLMLNKLMEKKQIKCHLYWPNEMG
ADKALKLPHVKLTVELVRLETYQNFVRRWFKLTDLETQQSREVMQFHYTT
WPDFGIPSSPNAFLKFLQQVRDSGCLSRDVGPAVVHCSAGIGRSGTFCLV
DCCLVLIDKYGECNVSKVLCELRSYRMGLIQTADQLDFSYQAIIEGIKKL
HDPTFLDAEEPLISNDTETHTLDELPPPLPPRVQSLNLPLAPNSGGILSL
NMRAAQANGAESIGKELSKDALNNFINQHDMIHDAEVADSRPLPPLPVRA
FNDSDSDEDYLLDDDDEDDTDEDEEYETINEHDADPVNGHVPATTQPHAD
DVNANNEKPAVPVDEQHKANGIDPIPGQLPASPENELKRRKRNEYQASLE
QKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVGVICAYAYTKLGAS
FLDH
BO33194.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:38:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ptp61F-PA | 548 | CG9181-PA | 1..548 | 1..548 | 2897 | 100 | Plus |
Ptp61F-PB | 535 | CG9181-PB | 1..524 | 1..524 | 2778 | 100 | Plus |
Ptp61F-PC | 530 | CG9181-PC | 29..519 | 34..524 | 2601 | 99.8 | Plus |
Ptp61F-PE | 431 | CG9181-PE | 1..431 | 118..548 | 2277 | 100 | Plus |
Ptp61F-PD | 431 | CG9181-PD | 1..431 | 118..548 | 2277 | 100 | Plus |