BO33249.complete Sequence
2542 bp assembled on 2012-09-19
GenBank Submission: KX798074
> BO33249.complete
GAAGTTATCAGTCGACATGAAATGTAAAAGCTGGTCCAACAAAATTAACA
ACTACGTTGTGCGCAAAATAAAGTCTATCAAGATCAACGGTACACAGCAA
CAGCTCCAATTGCCAGGCAGCGGCGCTAGCGGAATCGCAGCGGCAGCCGT
AATCACGGTAGCATCGGATTGCGGCGAAAACTGCAGCAGTAACGGCACCG
AGCATCAGCAGCACTTCAACATTGCTACCACCACAGCAACTTCGGCGACA
GAGGCAACAATGCCGGCTATGGCCAAGGAGAAAGCATCAGCAACAGTGTC
CTTGGGCGAGTCGAATTTCAGAGATATCAACCTAAAAGACTTGGCCGTGG
TCGTCGAAGCGGCATCGCGGCTGCACCACCAGCAAAACGTATGCGGCTGC
GGAGCGGTATCGTCTACTGAGAACAACAACAACAGTCGCTACGGCAGCAG
CAAGTATCTGACAAACGGCCACACGTCGCCTTTGGCGGCAGCGGTTGCTA
GCAACAGTTCGTCGGTGGCCACGACACCGCATTGCAGAATGTTGCACAAC
TGCAGTCTGCAGCAGTACCAGAATGACATAAGGCAGCAGACGGAGATATT
GGACATGTTGCGGCAGCAGCATCAGCAGGGCTACCAGTCGCAGCAACAGC
AACAACAGCCGCAGCAGCAGCAGGAACAACAGCAGCAGCAGGAGCAATCG
CAGCAGCAGCAACAGCTACAGAATCCTGCGCCCAGGAGGTCTCCGAATGA
TTTCATTTTCGGTCGTTACATAGGCGAGGGCAGCTATAGCATAGTTTATC
TGGCCGTGGATATACACTCTCGCCGCGAGTATGCAATTAAAGTATGCGAG
AAGCGGCTGATCCTGCGCGAACGGAAGCAGGACTACATCAAGCGTGAACG
CGAGGTGATGCACCAGATGACCAACGTTCCCGGCTTCGTAAACCTGTCGT
GCACCTTCCAGGACCAGCGTTCTCTTTACTTTGTGATGACGTACGCGCGA
AAGGGCGACATGTTGCCATACATCAACCGCGTGGGTAGCTTTGACGTGGC
CTGCACGCGCCACTACGCTGCCGAGCTTCTGCTGGCCTGCGAGCACATGC
ACCGCCGTAATGTGGTGCACCGCGACCTCAAGCCCGAGAACATCCTGCTC
GACGAGGACATGCACACGCTAATCGCCGACTTCGGTTCCGCCAAGGTGAT
GACAGCCCACGAAAGGGCTCTGGCCACGGAGCACTGTTCGGAGCAGCGGC
GCAGCAACTCCGATGAAGACGATGAAGACAGCGACCGCCTGGAAAACGAA
GACGAAGACTTCTACGATCGCGATTCGGAGGAGTTGGACGACGGCGACGA
CGAACAGCAGCAGGAAGAGATGGACTCCCCACGCCATCGTCAAAGGCGTT
ACAACCGTCACCGAAAGGCAAGCTTTGTGGGCACTGCCCAGTACGTTTCA
CCGGAAGTGCTCCAAAATGGACCTATAACCCCGGCGGCGGACCTGTGGGC
ACTGGGATGTATAGTTTATCAGATGATCGCCGGCCTACCGCCATTCCGTG
GCAGCAACGATTATGTCATTTTTAAAGAGATTCTTGACTGCGCCGTGGAC
TTCCCGCAAGGCTTTGATAAGGACGCCGAGGACCTGGTGCGCAAGCTGCT
CCGTGTCGATCCGCGAGACCGCCTGGGTGCTCAGGACGAGTTTGGATATT
ACGAATCCATTCGGGCGCACCCATTCTTCGCCGGCATTGACTGGCAGACG
CTCCGTCAACAAACCCCTCCCCCCATCTACCCATACTTACCGGGCGTAAG
TCAGGATGAGGACTTCAGGTCCAGCTATACTGTGCCCGGGGATTTGGAGC
CTGGCCTTGACGAACGGCAGATATCGCGACTGCTTAGTGCAGAATTAGGC
GTTGGCAGCAGCGTGGCCATGCCCGTCAAGCGATCGACCGCAAAGAACTC
TTTCGACCTGAACGATGCCGAGAAGCTGCAGCGTCTCGAGCAACAAAAGA
CTGACAAGTGGCACGTTTTTGCCGACGGCGAAGTGATCCTCAAGAAGGGG
TTTGTCAACAAGCGCAAGGGTCTGTTTGCCCGCAAGCGAATGCTCCTTCT
GACCACGGGACCGCGACTCATCTATATCGATCCCGTGCAGATGATCAAAA
AAGGAGAAATTCCGTGGAGCCCAGATCTCCGAGCGGAGTACAAAAACTTC
AAAATTTTTTTTGTCCATACGCCAAATCGAACCTATTACCTGGATGATCC
CGAAGGCTATGCTATCCACTGGTCGGAAGCTATTGAGAACATGCGCAAGT
TGGCCTACGGAGATCCCTCCTCCACATCTGCAGTGTCCTGCTCCAGCGGC
AGCAGTAATAGCCTGGCTGTCATCTCAAATTCATCCGCCGCCTCCTCAAG
CAATTCGCCCACGGTGAAACGCAGTTCCCCCGTAAACGCTCCTCAAGCTT
CGACGGCGTCTGACAACCGGACATTGGGTAGCACCAGAACGGGGACGTCA
CCTAGCAAGAAGACGGCGTCTAAGGCAAGCTTTCTAGACCAT
BO33249.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:04:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdk1-RJ | 2511 | CG1210-PJ | 1..2508 | 17..2524 | 12540 | 100 | Plus |
| Pdk1-RD | 2511 | CG1210-PD | 1..2508 | 17..2524 | 12540 | 100 | Plus |
| Pdk1-RC | 2460 | CG1210-PC | 14..2457 | 81..2524 | 12220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:04:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdk1-RJ | 4959 | CG1210-RJ | 373..2881 | 16..2524 | 12545 | 100 | Plus |
| Pdk1-RD | 3706 | CG1210-RD | 373..2881 | 16..2524 | 12545 | 100 | Plus |
| Pdk1-RH | 4347 | CG1210-RH | 427..2871 | 80..2524 | 12225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:04:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 141765..142879 | 832..1946 | 5560 | 99.9 | Plus |
| 3L | 28110227 | 3L | 135456..135843 | 81..468 | 1940 | 100 | Plus |
| 3L | 28110227 | 3L | 135966..136339 | 467..840 | 1855 | 99.7 | Plus |
| 3L | 28110227 | 3L | 143514..143817 | 2221..2524 | 1520 | 100 | Plus |
| 3L | 28110227 | 3L | 142943..143217 | 1947..2221 | 1375 | 100 | Plus |
| 3L | 28110227 | 3L | 129822..129888 | 16..82 | 335 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 12:04:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2686 | 368..717 | 268 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2660 | 422..727 | 190 | 56.5 | Plus |
BO33249.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-19 11:11:58 Download gff for
BO33249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pk61C-RD | 372..2879 | 17..2526 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:37 Download gff for
BO33249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdk1-RD | 374..2881 | 17..2526 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:34 Download gff for
BO33249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdk1-RD | 374..2881 | 17..2526 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:34 Download gff for
BO33249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 129823..129888 | 17..82 | 100 | -> | Plus |
| 3L | 135458..135842 | 83..467 | 100 | -> | Plus |
| 3L | 135967..136335 | 468..836 | 100 | -> | Plus |
| 3L | 141770..142879 | 837..1946 | 100 | -> | Plus |
| 3L | 142943..143217 | 1947..2221 | 100 | -> | Plus |
| 3L | 143515..143817 | 2222..2526 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:37 Download gff for
BO33249.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 129823..129888 | 17..82 | 100 | -> | Plus |
| arm_3L | 135458..135842 | 83..467 | 100 | -> | Plus |
| arm_3L | 135967..136335 | 468..836 | 100 | -> | Plus |
| arm_3L | 141770..142879 | 837..1946 | 100 | -> | Plus |
| arm_3L | 142943..143217 | 1947..2221 | 100 | -> | Plus |
| arm_3L | 143515..143817 | 2222..2526 | 99 | | Plus |
BO33249.pep Sequence
Translation from 16 to 2542
> BO33249.pep
MKCKSWSNKINNYVVRKIKSIKINGTQQQLQLPGSGASGIAAAAVITVAS
DCGENCSSNGTEHQQHFNIATTTATSATEATMPAMAKEKASATVSLGESN
FRDINLKDLAVVVEAASRLHHQQNVCGCGAVSSTENNNNSRYGSSKYLTN
GHTSPLAAAVASNSSSVATTPHCRMLHNCSLQQYQNDIRQQTEILDMLRQ
QHQQGYQSQQQQQQPQQQQEQQQQQEQSQQQQQLQNPAPRRSPNDFIFGR
YIGEGSYSIVYLAVDIHSRREYAIKVCEKRLILRERKQDYIKREREVMHQ
MTNVPGFVNLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACTRHY
AAELLLACEHMHRRNVVHRDLKPENILLDEDMHTLIADFGSAKVMTAHER
ALATEHCSEQRRSNSDEDDEDSDRLENEDEDFYDRDSEELDDGDDEQQQE
EMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITPAADLWALGCIV
YQMIAGLPPFRGSNDYVIFKEILDCAVDFPQGFDKDAEDLVRKLLRVDPR
DRLGAQDEFGYYESIRAHPFFAGIDWQTLRQQTPPPIYPYLPGVSQDEDF
RSSYTVPGDLEPGLDERQISRLLSAELGVGSSVAMPVKRSTAKNSFDLND
AEKLQRLEQQKTDKWHVFADGEVILKKGFVNKRKGLFARKRMLLLTTGPR
LIYIDPVQMIKKGEIPWSPDLRAEYKNFKIFFVHTPNRTYYLDDPEGYAI
HWSEAIENMRKLAYGDPSSTSAVSCSSGSSNSLAVISNSSAASSSNSPTV
KRSSPVNAPQASTASDNRTLGSTRTGTSPSKKTASKASFLDH
BO33249.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:39:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdk1-PJ | 836 | CG1210-PJ | 1..836 | 1..836 | 4361 | 100 | Plus |
| Pdk1-PD | 836 | CG1210-PD | 1..836 | 1..836 | 4361 | 100 | Plus |
| Pdk1-PC | 819 | CG1210-PC | 4..819 | 21..836 | 4249 | 99.9 | Plus |
| Pdk1-PF | 755 | CG1210-PF | 1..755 | 82..836 | 3945 | 100 | Plus |
| Pdk1-PH | 755 | CG1210-PH | 1..755 | 82..836 | 3945 | 100 | Plus |
