BO33307.complete Sequence
1216 bp assembled on 2013-01-22
GenBank Submission: KX797495
> BO33307.complete
GAAGTTATCAGTCGACATGGAGGTACCACCGCCACTTGTACTCAAGCGAC
CGCTCTATGTGCCCAGCAAGACGTTGATGGGGCCCGGACCCTCCAACTGT
TCCCATCGCGTCCTGGAGGCCATGAGCAATCCGGTGTTGGGTCACATGCA
TCCCGAATGCCTGCAGATCATGGACGAGGTGAAGGAGGGCATTAAGTACA
TCTTTCAGACACTCAACGATGCCACCATGTGCATCAGCGGCGCCGGCCAC
TCGGGCATGGAGGCCGCTCTGTGCAATCTGATCGAGGATGGCGATGTGGT
GCTCATGGGCATCACGGGCGTCTGGGGTCATCGGGCCGGGGATATGGCCC
GTCGCTATGGTGCCGAAGTTCACTACGTGGAGGCGAGTTTCGGCCGGGCA
CTGTCGCACGAAGAGATCACATTCGCCTTCGAGGCGCATCGACCCAAGGT
CTTCTTCATTGCCCAGGGTGACTCCTCGACTGGCATTATCCAGCAGAATA
TCCGTGAGCTGGGCGAACTGTGCCGCAAGTACGATTGCTTCCTCATCGTC
GATACGGTGGCTTCGCTCGGCGGCACCGAATTCCTCATGGACGAGTGGAA
GGTGGATGTGGCGTACACGGGTTCGCAGAAATCGCTCGGTGGTCCCGCCG
GTCTAACGCCCATTTCGTTCAGCAAGCGTGCTTTGACCCGCATCCGAAAG
CGAAAGACCAAGCCGAAGGTTTACTACTTCGATATCCTGCTGATTGGTCA
GTACTGGGGTTGCTATGGCACACCCCGCATCTACCACCACACCATATCCT
CCACCCTGCTCTACGGATTGCGTGAGGCACTGGCCCACTTTTGTGCCGTC
GGCCTCAAGGCGGTGGTGCGTCGCCATCAGGAGTGCTCCAAGCGACTGCA
GTTGGGCATCGAGGAGCTGGGTCTTGAGATGTTTGTGTCGCGCGAGGAGG
AGCGTTTGCCCACGGTGAACACGATTAAGGTGCCCTTCGGCGTCGACTGG
AAAAAGGTGGCCGAGTACGCCATGCGCAAGTACAGCGTTGAGATTAGCGG
TGGTCTGGGTCCCACGGTGGAGCACGTCTTCCGTATCGGTTTAATGGGCG
AAAACGCTACCGTGGAGCGCGTGGACATGGTGCTCAGCATCCTGAACGAG
GCCATTCAGAGCAGCAAGCTGGGGATCAAGACGGATCTATCGAAAATCGC
AAGCTTTCTAGACCAT
BO33307.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:09:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spat-RA | 1185 | CG3926-PA | 1..1182 | 17..1198 | 5910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spat-RA | 1410 | CG3926-RA | 168..1350 | 16..1198 | 5915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:09:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6529561..6530431 | 161..1031 | 4355 | 100 | Plus |
| X | 23542271 | X | 6530498..6530666 | 1030..1198 | 845 | 100 | Plus |
| X | 23542271 | X | 6529115..6529265 | 16..166 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:09:21 has no hits.
BO33307.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-22 18:21:43 Download gff for
BO33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spat-RA | 169..1350 | 17..1200 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:26 Download gff for
BO33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spat-RA | 169..1350 | 17..1200 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:22:19 Download gff for
BO33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spat-RA | 169..1350 | 17..1200 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:22:19 Download gff for
BO33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6529116..6529265 | 17..166 | 100 | -> | Plus |
| X | 6529567..6530429 | 167..1029 | 100 | -> | Plus |
| X | 6530498..6530666 | 1030..1200 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:26 Download gff for
BO33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6423149..6423298 | 17..166 | 100 | -> | Plus |
| arm_X | 6423600..6424462 | 167..1029 | 100 | -> | Plus |
| arm_X | 6424531..6424699 | 1030..1200 | 98 | | Plus |
BO33307.pep Sequence
Translation from 16 to 1216
> BO33307.pep
MEVPPPLVLKRPLYVPSKTLMGPGPSNCSHRVLEAMSNPVLGHMHPECLQ
IMDEVKEGIKYIFQTLNDATMCISGAGHSGMEAALCNLIEDGDVVLMGIT
GVWGHRAGDMARRYGAEVHYVEASFGRALSHEEITFAFEAHRPKVFFIAQ
GDSSTGIIQQNIRELGELCRKYDCFLIVDTVASLGGTEFLMDEWKVDVAY
TGSQKSLGGPAGLTPISFSKRALTRIRKRKTKPKVYYFDILLIGQYWGCY
GTPRIYHHTISSTLLYGLREALAHFCAVGLKAVVRRHQECSKRLQLGIEE
LGLEMFVSREEERLPTVNTIKVPFGVDWKKVAEYAMRKYSVEISGGLGPT
VEHVFRIGLMGENATVERVDMVLSILNEAIQSSKLGIKTDLSKIASFLDH
BO33307.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spat-PA | 394 | CG3926-PA | 1..394 | 1..394 | 2059 | 100 | Plus |
