BO33313.complete Sequence
919 bp assembled on 2012-10-16
GenBank Submission: KX799143
> BO33313.complete
GAAGTTATCAGTCGACATGTCAGAGCCCGCAGCCCAACAACAGCAGTCCC
AGAACGGCAAGGAGCGCTCCAAGTCCACGGAGGAGAAGGAAGTACCACGC
GAACCGGCGCTGGTCCTCAAAGACATCGATATAAAGACTGAGCTAGAGAG
CCTAGTGAAACTGCTCGATGGCAAGATCTACAAGGAGGAGGAAGTGGCCA
TGGAGGAGCTGCATCAGTATCTGATCGAGGACGATGGCTCCTGGGCGCTG
GGCGACAACTTTCTGATCTTCGTGCAGCGCGTCCTGCGTGACAATCAGGC
CTTCTCGCCGGACACACGGATACACCTGATCCGCACGCTGGCCTATGCGG
CGCTCAAAGATGATGTGATCATCATTCTGCACCAGGATCGAAGGGATCAC
ACACTGATGAACTACGCCCAGGACATTGACAAGCAGACGCCCGAGGAGCA
GCAGGCCTGGGCCATGTTTATGTGCAATCTCTTTGAGAACCTGGGTCCCT
CCGAATGGCTGTTGTACATTTCGGAGTGGGAATACAATGGTCAGACCATC
TCCAACATACGAGTGACCACCAAGGTGGCCGTCCACTGCATCCTCTCCAA
TTGCCCGCAGCTGAAAAATATTGGCAGCATGATCCTGTACAACATTGCTA
TTAAGGAAGTGAAGACTGTGGTATTCGACGATATCGCCGTGGAGCTGGCC
ATGGCCATTCTTCAGTTCTTCCAGAGCAGTCCCAACGAAGACCAAATCTT
CCGCACCCTGAGGGCCCTCGTTCGATTCCTCGAGGTCTCGCAAGACGTAC
CGATGATCATTCAAATGATTGGACCGCATCCAAAACAATTCGCCGGCAAG
AGCGAGCGCGTGGATGAGCTGATAAAGATCATTAGTCGCAAGGTGCCCGC
CGCAAGCTTTCTAGACCAT
BO33313.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:53:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6972-RA | 888 | CG6972-PA | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6972-RA | 1305 | CG6972-RA | 292..1176 | 17..901 | 4425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22703254..22703592 | 131..469 | 1695 | 100 | Plus |
3R | 32079331 | 3R | 22703652..22703856 | 470..674 | 1025 | 100 | Plus |
3R | 32079331 | 3R | 22704091..22704209 | 783..901 | 595 | 100 | Plus |
3R | 32079331 | 3R | 22703908..22704024 | 670..786 | 585 | 100 | Plus |
3R | 32079331 | 3R | 22702926..22703043 | 17..134 | 575 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:53:17 has no hits.
BO33313.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-16 14:02:19 Download gff for
BO33313.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6972-RA | 292..1176 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:57:01 Download gff for
BO33313.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6972-RA | 292..1176 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:07 Download gff for
BO33313.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6972-RA | 292..1176 | 17..903 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:07 Download gff for
BO33313.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22702926..22703039 | 17..130 | 100 | -> | Plus |
3R | 22703254..22703592 | 131..469 | 100 | -> | Plus |
3R | 22703652..22703852 | 470..670 | 100 | -> | Plus |
3R | 22703909..22704022 | 671..784 | 100 | -> | Plus |
3R | 22704093..22704209 | 785..903 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:57:01 Download gff for
BO33313.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18528648..18528761 | 17..130 | 100 | -> | Plus |
arm_3R | 18528976..18529314 | 131..469 | 100 | -> | Plus |
arm_3R | 18529374..18529574 | 470..670 | 100 | -> | Plus |
arm_3R | 18529631..18529744 | 671..784 | 100 | -> | Plus |
arm_3R | 18529815..18529931 | 785..903 | 98 | | Plus |
BO33313.pep Sequence
Translation from 16 to 919
> BO33313.pep
MSEPAAQQQQSQNGKERSKSTEEKEVPREPALVLKDIDIKTELESLVKLL
DGKIYKEEEVAMEELHQYLIEDDGSWALGDNFLIFVQRVLRDNQAFSPDT
RIHLIRTLAYAALKDDVIIILHQDRRDHTLMNYAQDIDKQTPEEQQAWAM
FMCNLFENLGPSEWLLYISEWEYNGQTISNIRVTTKVAVHCILSNCPQLK
NIGSMILYNIAIKEVKTVVFDDIAVELAMAILQFFQSSPNEDQIFRTLRA
LVRFLEVSQDVPMIIQMIGPHPKQFAGKSERVDELIKIISRKVPAASFLD
H
BO33313.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:58:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6972-PA | 295 | CG6972-PA | 1..295 | 1..295 | 1505 | 100 | Plus |