BO33314.complete Sequence
694 bp assembled on 2012-08-22
GenBank Submission: KX799363
> BO33314.complete
GAAGTTATCAGTCGACATGTCCTTATCGGCCATAGCCAAGCCAATACTCT
ACTCGTATTGGCGCAGCTCGTGCTCCTGGCGCGTGCGCATTGCGATGAAC
CTGAAGGAGATACCCTACGACATCAAGCCGATCAGCCTGATCAAATCCGG
TGGCGAGCAGCACTGCAATGAGTACCGCGAGGTGAATCCAATGGAGCAGG
TGCCCGCCCTACAGATTGATGGACACACCCTCATCGAATCGGTAGCCATA
ATGCACTACCTGGAGGAAACACGTCCCCAGCGACCACTCCTGCCACAGGA
CGTCCACAAGCGGGCCAAGGTGCGCGAAATAGTCGAGATCATTTGCTCTG
GCATCCAGCCCCTGCAGAACCTCATCGTGCTCATCCATGTGGGCGAGGAG
AAGAAGAAGGAGTGGGCCCAGCACTGGATTACACGAGGCTTCCGGGCGGT
TGAGAAGGCGCTGTCCACTTCGGCCGGCAAATATTGCGTGGGCGATGAGA
TCTCCATGGCGGACTGCTGCCTCGTACCTCAGGTGTTCAATGCCCGAAGA
TTCCACGTCGACTTGCGACCGTATCCCATAATTCTGCGCATCGATCGCGA
ACTGGAGAGCAATCCGGCATTCCGGGCGGCCCATCCCTCCAATCAACCGG
ACTGTCCGCCGGAGCTGCCCAACAAAGCAAGCTTTCTAGACCAT
BO33314.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstZ2-RB | 663 | CG9363-PB | 1..660 | 17..676 | 3300 | 100 | Plus |
| GstZ2-RA | 684 | CG9363-PA | 44..681 | 39..676 | 3190 | 100 | Plus |
| GstZ2-RC | 648 | CG9363-PC | 10..645 | 41..676 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:24:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstZ2-RB | 2202 | CG9363-RB | 359..1018 | 17..676 | 3300 | 100 | Plus |
| GstZ2-RA | 1062 | CG9363-RA | 73..710 | 39..676 | 3190 | 100 | Plus |
| GstZ2-RC | 1093 | CG9363-RC | 50..685 | 41..676 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:24:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9458203..9458534 | 549..218 | 1660 | 100 | Minus |
| 3R | 32079331 | 3R | 9458595..9458774 | 218..39 | 900 | 100 | Minus |
| 3R | 32079331 | 3R | 9457999..9458127 | 676..548 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:24:18 has no hits.
BO33314.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:22 Download gff for
BO33314.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9363-RB | 347..1006 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:36 Download gff for
BO33314.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstZ2-RB | 359..1018 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:24 Download gff for
BO33314.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstZ2-RB | 359..1018 | 17..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:24 Download gff for
BO33314.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9457997..9458125 | 550..678 | 98 | <- | Minus |
| 3R | 9458203..9458533 | 219..549 | 100 | <- | Minus |
| 3R | 9458595..9458772 | 41..218 | 100 | <- | Minus |
| 3R | 9460271..9460294 | 17..40 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:36 Download gff for
BO33314.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5283719..5283847 | 550..678 | 98 | <- | Minus |
| arm_3R | 5283925..5284255 | 219..549 | 100 | <- | Minus |
| arm_3R | 5284317..5284494 | 41..218 | 100 | <- | Minus |
| arm_3R | 5285993..5286016 | 17..40 | 100 | | Minus |
BO33314.pep Sequence
Translation from 16 to 694
> BO33314.pep
MSLSAIAKPILYSYWRSSCSWRVRIAMNLKEIPYDIKPISLIKSGGEQHC
NEYREVNPMEQVPALQIDGHTLIESVAIMHYLEETRPQRPLLPQDVHKRA
KVREIVEIICSGIQPLQNLIVLIHVGEEKKKEWAQHWITRGFRAVEKALS
TSAGKYCVGDEISMADCCLVPQVFNARRFHVDLRPYPIILRIDRELESNP
AFRAAHPSNQPDCPPELPNKASFLDH
BO33314.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstZ2-PB | 220 | CG9363-PB | 1..220 | 1..220 | 1171 | 100 | Plus |
| GstZ2-PA | 227 | CG9363-PA | 11..227 | 4..220 | 1139 | 98.2 | Plus |
| GstZ2-PC | 215 | CG9363-PC | 4..215 | 9..220 | 1137 | 100 | Plus |
| GstZ1-PA | 246 | CG9362-PA | 33..246 | 8..220 | 794 | 67.3 | Plus |
| gfzf-PD | 234 | CG33546-PD | 3..181 | 11..189 | 147 | 25.5 | Plus |
