BO33323.complete Sequence
1025 bp assembled on 2012-08-22
> BO33323.complete
GGAAAGGTCCACGTTGGAGCCGAGGGAACGCGGCCCGCTAACTCTCGTAT
AGCATACATTATACGAAGTTATCAGTCGACATGCTAGACGGTTGGTACTG
CAGATCCCTGGCCAACCAGGAGGATGGCGCCATAAAGGACGAGCCGCCGA
GCGACGACGAGCCCGCACAGCCCGCCAGAGATCGCGTCCCGCCAATTTCC
CGCGGAGCAGCGCCCGCTAGCTCATCCTCCGTATCCGCGGGCCTGGGCGC
AGGCGAGACTGACTTCAAGGAGCGCTACAAGAACCTCAAGAAGAAGCTGA
AGTTCCTCATCTATGAGAACGAGTACTTCCAGGATCTATTGCACACCAAC
CAGCGGCGTCTGCTGAAAGTTTCCCGGGATCGTACCTTCCTGCTGGACCG
TCTGCTGGTGTACGAGAAGCCGGCCAAGGACTCTAGCGACTCGGATGCCA
CCGACAGCTCCGATTCGGAGCCAGCTTCTACGTCCGGCGTTGCCGGCGGA
TCGCAAACATCCAAGGACGCCATTCGGCGCAAGCACAAAGACAAGGGGGC
ACCAGGAATTCCAGGTGTGCCTCCGCACATGCCCACAGTGGGCGCCCCAC
GAGGTCGAAGACGAAAAATCCTAACCGGAATGTTGCCCGCGAACCATGGA
ATCCCAGCAATTGCTGCGAAAAAACAACTTACCGCCACGGTGTCACCTTC
GCAGCAGCCACCGCAACTACAGACTGCTCCGAAGGATGTGTCGCCCGGCC
TCAGCCAAGCGGAGATTGCCCGCCAGCTGCAGGAGCGACGACCGACGCCG
TTGGAGCTATTGAGTCCGGAATGCACTTCGGCCACCGTGCCCACAACGAT
GCTCAGCGATGAAAGCCCCTCTAAGTGTTATCCCAATGAAAGCCTGCAGC
ATCTGATGGAGGACGACTCTCACTCGCACGAGGTGGCCGCCGAGGAGTGC
GTGCCCATGGAGTACACAAGTGCAAGCTTTCATAGACCTATTCGTGTGGG
CGGCGCGGGGCGGGGCGGAAGGGGT
BO33323.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:23:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-RA | 894 | CG18004-PA | 1..891 | 81..971 | 4455 | 100 | Plus |
| CG18004-RB | 876 | CG18004-PB | 4..873 | 102..971 | 4350 | 100 | Plus |
| CG18004-RD | 876 | CG18004-PD | 1..873 | 81..971 | 4150 | 98 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-RA | 1044 | CG18004-RA | 83..973 | 81..971 | 4455 | 100 | Plus |
| CG18004-RB | 1168 | CG18004-RB | 228..1097 | 102..971 | 4350 | 100 | Plus |
| CG18004-RD | 1026 | CG18004-RD | 83..955 | 81..971 | 4150 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:23:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10885590..10886152 | 315..877 | 2815 | 100 | Plus |
| 2R | 25286936 | 2R | 10885299..10885533 | 81..315 | 1175 | 100 | Plus |
| 2R | 25286936 | 2R | 10886210..10886304 | 877..971 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:23:49 has no hits.
BO33323.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:21 Download gff for
BO33323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RA | 66..963 | 81..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:31 Download gff for
BO33323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RA | 83..980 | 81..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:16 Download gff for
BO33323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18004-RA | 83..980 | 81..979 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:16 Download gff for
BO33323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10885299..10885532 | 81..314 | 100 | -> | Plus |
| 2R | 10885590..10886152 | 315..877 | 100 | -> | Plus |
| 2R | 10886211..10886311 | 878..979 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:31 Download gff for
BO33323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6772804..6773037 | 81..314 | 100 | -> | Plus |
| arm_2R | 6773095..6773657 | 315..877 | 100 | -> | Plus |
| arm_2R | 6773716..6773816 | 878..979 | 96 | | Plus |
BO33323.pep Sequence
Translation from 80 to 1025
> BO33323.pep
MLDGWYCRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSS
VSAGLGAGETDFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRD
RTFLLDRLLVYEKPAKDSSDSDATDSSDSEPASTSGVAGGSQTSKDAIRR
KHKDKGAPGIPGVPPHMPTVGAPRGRRRKILTGMLPANHGIPAIAAKKQL
TATVSPSQQPPQLQTAPKDVSPGLSQAEIARQLQERRPTPLELLSPECTS
ATVPTTMLSDESPSKCYPNESLQHLMEDDSHSHEVAAEECVPMEYTSASF
HRPIRVGGAGRGGRG
BO33323.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18004-PA | 297 | CG18004-PA | 1..297 | 1..297 | 1542 | 100 | Plus |
| CG18004-PB | 291 | CG18004-PB | 2..291 | 8..297 | 1494 | 100 | Plus |
| CG18004-PD | 291 | CG18004-PD | 1..291 | 1..297 | 1491 | 98 | Plus |
