BO33325.complete Sequence
694 bp assembled on 2012-08-22
GenBank Submission: KX797125
> BO33325.complete
GAAGTTATCAGTCGACATGGAAACAGTTCGCACCGGTTCGCTCGAGTGTG
CAGTAGATGATCCAGCGGCAGGAATGGCGGCCACGATCCAGAACACCCTG
AAGGTGGCGCTGCGAAAGCGCATGAAGGATGCACTGAAGGGCATCGACGC
GGAGGCCATCGCCCGGCAGTCGCAGGCCGTCACGGCTAAGGTGCTGCAAA
GCGAGATCTTCCGGCAGGCGCAGCGGGTGAGCATTTACCTGAGCACAGCC
TCGGAGCTGGACACCACGGCGCTGCTGTCGGAGATGTTCCGCCTGGAGAA
GATGGTCTTTGTGCCCACCTACGAGGGCAGCAGGATGAAGATGGTGCGGC
TGCGCGGCATGGAGGAGTACGAGAGCCTGCCTCTGACCAAGTGGAACATA
AAGCAGCCGGACTTCAAGGAGGCACGCGAGGATGCCATGACCAACGGGCA
CGGCATCGATCTCTTCATTGTGCCCGGTGTGGCCTTCACCCGCTGCGGAG
CTCGGATGGGCCATGGCATGGGCTACTACGACAAGTTCCTCAAGCAGCAC
GCGGAGAAGTATCCGCACAAGAAGATCTCGCTGATGGCACTGTCGCTCAA
CGAGCAGATAGTCAGCAACGAGGAGTTGCCCATGGAGTCGCACGACGTCC
GTTTGCACAGTGTAATTACGGAAAACGCAAGCTTTCTAGACCAT
BO33325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34424-RA | 606 | CG34424-PA | 1..603 | 74..676 | 3015 | 100 | Plus |
| CG34424-RB | 606 | CG34424-PB | 1..603 | 74..676 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34424-RA | 915 | CG34424-RA | 209..868 | 17..676 | 3300 | 100 | Plus |
| CG34424-RB | 699 | CG34424-RB | 1..652 | 25..676 | 3260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23359668..23359926 | 189..447 | 1295 | 100 | Plus |
| 2R | 25286936 | 2R | 23359989..23360219 | 446..676 | 1155 | 100 | Plus |
| 2R | 25286936 | 2R | 23359423..23359598 | 17..192 | 880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:25:12 has no hits.
BO33325.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:25 Download gff for
BO33325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34424-RA | 205..864 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:49 Download gff for
BO33325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34424-RA | 209..868 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:45 Download gff for
BO33325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34424-RA | 209..868 | 17..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:45 Download gff for
BO33325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23359423..23359596 | 17..190 | 100 | -> | Plus |
| 2R | 23359670..23359925 | 191..446 | 100 | -> | Plus |
| 2R | 23359990..23360219 | 447..678 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:49 Download gff for
BO33325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19246946..19247119 | 17..190 | 100 | -> | Plus |
| arm_2R | 19247193..19247448 | 191..446 | 100 | -> | Plus |
| arm_2R | 19247513..19247742 | 447..678 | 99 | | Plus |
BO33325.pep Sequence
Translation from 16 to 694
> BO33325.pep
METVRTGSLECAVDDPAAGMAATIQNTLKVALRKRMKDALKGIDAEAIAR
QSQAVTAKVLQSEIFRQAQRVSIYLSTASELDTTALLSEMFRLEKMVFVP
TYEGSRMKMVRLRGMEEYESLPLTKWNIKQPDFKEAREDAMTNGHGIDLF
IVPGVAFTRCGARMGHGMGYYDKFLKQHAEKYPHKKISLMALSLNEQIVS
NEELPMESHDVRLHSVITENASFLDH
BO33325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34424-PA | 201 | CG34424-PA | 1..201 | 20..220 | 1015 | 100 | Plus |
| CG34424-PB | 201 | CG34424-PB | 1..201 | 20..220 | 1015 | 100 | Plus |
