BO33326.complete Sequence
847 bp assembled on 2012-08-22
GenBank Submission: KX795846
> BO33326.complete
GAAGTTATCAGTCGACATGGCCGAACTGGACGATTTCTTCGCGAAAAAGG
ACAAGAAGAAGTCCAAGAACAAGACTAAGTTCGTGACCGCCGACGAGATG
GTGAAGAACCTGGAGGACGGCACCAAGCGCGAGGTGGTCAAGCCCAAAAA
ACCTGAGGTAGCCGCTGGCGGCGTGGCAGTAGTAGGCGAAAACGAGAATA
GCGGCACCAAGGTGCCAGAGTCCGCCCCGCCCGTCGAGGAGGAATGGAAG
GAGTTCGAGGAGGAGCAGCGCAAGGACTACAGTGGCTTAAAGATCGGCCA
GCTGAGCACCATCTCTTCGGCCCGTTCCAGAACTGCCCAGGAAAGTTCCG
AGTCGCAAGCTGCTCGAGTGCCCTCTGCCCCGGACGGCGGCAACTACAAT
GAGGACGATGAGGACAGCAATGGGTATGACAACGCGGACGTAAACAAGGA
GCGCGTCGGCCACGGACCCTGGAAGAAAGTTGTCCCAGCCGAGGAGGTAA
TGCAGATTCCGGTGCCCGTGGAGGTGGAAAAGCACTCGTCCAAGACCTAC
GTTTCACCCGCGCTACGATACAGCCAGCAGGCCGGAAGTGGACTGGGAGG
CGGCCCTACTGGGGGGGCATTGCGTCCACGACGCGCCGCCCCCGACATCA
CCAATACCGAGTTTTTCCCAACCTTAAGTGCGGCGCGTCCGGAGGAACAG
CGCAAGAAGAAAAACGAACCCGCCTTCGAAGAAGTCCGTCACGGAAGCCG
TTTCCAGCGTGTTCAGGAGTCCACGGCTGCCCCGGTGGCGGCCTCCAACC
GATTCCAGTCGCTTGACGACGAAGCAAGCGCAAGCTTTCTAGACCAT
BO33326.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:25:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3760-RA | 816 | CG3760-PA | 1..813 | 17..829 | 4065 | 100 | Plus |
| CG3760-RC | 798 | CG3760-PC | 1..795 | 17..829 | 3760 | 97.8 | Plus |
| CG3760-RB | 798 | CG3760-PB | 1..795 | 17..829 | 3760 | 97.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:25:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3760-RA | 1060 | CG3760-RA | 89..902 | 16..829 | 4070 | 100 | Plus |
| CG3760-RC | 1240 | CG3760-RC | 201..996 | 16..829 | 3765 | 97.8 | Plus |
| CG3760-RB | 1128 | CG3760-RB | 89..884 | 16..829 | 3765 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:25:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24938956..24939217 | 313..574 | 1310 | 100 | Plus |
| 2R | 25286936 | 2R | 24939271..24939525 | 575..829 | 1275 | 100 | Plus |
| 2R | 25286936 | 2R | 24938460..24938673 | 16..229 | 1070 | 100 | Plus |
| 2R | 25286936 | 2R | 24938759..24938842 | 229..312 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:25:23 has no hits.
BO33326.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:26 Download gff for
BO33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3760-RA | 123..935 | 17..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:52 Download gff for
BO33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3760-RA | 90..902 | 17..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:48 Download gff for
BO33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3760-RA | 90..902 | 17..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:48 Download gff for
BO33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24939271..24939525 | 575..831 | 99 | | Plus |
| 2R | 24938461..24938673 | 17..229 | 100 | -> | Plus |
| 2R | 24938760..24938842 | 230..312 | 100 | -> | Plus |
| 2R | 24938956..24939217 | 313..574 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:52 Download gff for
BO33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20825984..20826196 | 17..229 | 100 | -> | Plus |
| arm_2R | 20826283..20826365 | 230..312 | 100 | -> | Plus |
| arm_2R | 20826479..20826740 | 313..574 | 100 | -> | Plus |
| arm_2R | 20826794..20827048 | 575..831 | 99 | | Plus |
BO33326.pep Sequence
Translation from 16 to 847
> BO33326.pep
MAELDDFFAKKDKKKSKNKTKFVTADEMVKNLEDGTKREVVKPKKPEVAA
GGVAVVGENENSGTKVPESAPPVEEEWKEFEEEQRKDYSGLKIGQLSTIS
SARSRTAQESSESQAARVPSAPDGGNYNEDDEDSNGYDNADVNKERVGHG
PWKKVVPAEEVMQIPVPVEVEKHSSKTYVSPALRYSQQAGSGLGGGPTGG
ALRPRRAAPDITNTEFFPTLSAARPEEQRKKKNEPAFEEVRHGSRFQRVQ
ESTAAPVAASNRFQSLDDEASASFLDH
BO33326.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3760-PA | 271 | CG3760-PA | 1..271 | 1..271 | 1393 | 100 | Plus |
| CG3760-PC | 265 | CG3760-PC | 1..265 | 1..271 | 1350 | 97.8 | Plus |
| CG3760-PB | 265 | CG3760-PB | 1..265 | 1..271 | 1350 | 97.8 | Plus |
| CG3760-PD | 264 | CG3760-PD | 1..264 | 1..271 | 1333 | 97.4 | Plus |
