BO33329.complete Sequence
616 bp assembled on 2012-08-22
GenBank Submission: KX795605
> BO33329.complete
GAAGTTATCAGTCGACATGAGCGCTACCTGGGTAACGATTCTCAGCATCT
CGACTTGTGTGGTTCTGCTGAAGCTCAGTGAGATCAGGAGCAAGGAGAGC
TGTTATTATGTGACCTTCACGTATGCCAATTGGACGGATGACCGACCTCG
GTTTGTTGTGAACATGACCTTCTCGAATCAGACTGGCATCGGCTCAGTAA
CCACCATTAACGAGGAGATTGCCTCACCGGTGTCTCGCATCCTCATACTT
CAGCACTCCGGTCGGGGTAAGCCTCGCACCATATACAACGCCTCCACCAA
ACTGTGCGACCTGCAGAATGTCTTCAATTCCGTACCGCTTTTTAAGCCAG
CCAAGGACAACATGCTCAAGCAAAGTAACTACACGCTGAGCTGTCCTCTG
GTCAAAGGCACATACGTCATGATCAACATGCGCGTAAGCCCCAAAAACCC
ACTTCTGAGCCTTCTCTACCAACCGAAACAAACGTTCTCCGTGAGTGGCG
GCTTGTTTGAAGAACTTTCACGTGGCCGCAGACTAAGGGCGCTGTCCACC
TACTTCATGACTGGAAAGGTTGTGAAAAAGTACTGTGGATCCAATGAAGC
AAGCTTTCTAGACCAT
BO33329.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:26:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31976-RB | 585 | CG31976-PB | 1..582 | 17..598 | 2910 | 100 | Plus |
| CG31976-RC | 585 | CG31976-PC | 1..582 | 17..598 | 2910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31976-RB | 2206 | CG31976-RB | 1388..1970 | 16..598 | 2915 | 100 | Plus |
| CG31976-RC | 1014 | CG31976-RC | 196..778 | 16..598 | 2915 | 100 | Plus |
| CG31975-RC | 2206 | CG31975-RC | 1388..1970 | 16..598 | 2915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:26:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 138698..139200 | 598..96 | 2515 | 100 | Minus |
| 2L | 23513712 | 2L | 139256..139337 | 97..16 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:26:22 has no hits.
BO33329.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:28 Download gff for
BO33329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31975-RC | 1389..1970 | 17..600 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:01 Download gff for
BO33329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31976-RB | 1389..1970 | 17..600 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:08 Download gff for
BO33329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31975-RC | 1389..1970 | 17..600 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:08 Download gff for
BO33329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 138696..139198 | 98..600 | 99 | <- | Minus |
| 2L | 139256..139336 | 17..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:01 Download gff for
BO33329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 138696..139198 | 98..600 | 99 | <- | Minus |
| arm_2L | 139256..139336 | 17..97 | 100 | | Minus |
BO33329.pep Sequence
Translation from 16 to 616
> BO33329.pep
MSATWVTILSISTCVVLLKLSEIRSKESCYYVTFTYANWTDDRPRFVVNM
TFSNQTGIGSVTTINEEIASPVSRILILQHSGRGKPRTIYNASTKLCDLQ
NVFNSVPLFKPAKDNMLKQSNYTLSCPLVKGTYVMINMRVSPKNPLLSLL
YQPKQTFSVSGGLFEELSRGRRLRALSTYFMTGKVVKKYCGSNEASFLDH
BO33329.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31976-PB | 194 | CG31976-PB | 1..194 | 1..194 | 1001 | 100 | Plus |
| CG31976-PC | 194 | CG31976-PC | 1..194 | 1..194 | 1001 | 100 | Plus |
| CG12662-PA | 171 | CG12662-PA | 11..171 | 42..190 | 195 | 27.3 | Plus |
