Clone BO33331 Report

Search the DGRC for BO33331

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:333
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG31729-RA
Protein status:BO33331.pep: Imported from assembly
Sequenced Size:3295

Clone Sequence Records

BO33331.complete Sequence

3295 bp assembled on 2012-09-19

GenBank Submission: KX796340

> BO33331.complete
GAAGTTATCAGTCGACATGGATGATGCTACCTCCCAAAACTCGGCTGCAA
CGCCCATGACACGGGAGAACATTCCGTTGCTGAATCGTCAGCGAAATCGC
TGGTATCTCTTTAGCTGCTGGCGAAAATGGTTCCGGCCACGGGAGCTGAG
AGCCCGCACCGTAAATCTCGGACGGGTCAATACGGAGAAGTTCCCACCGA
ACGAGATCCGGAATCAGAAGTACAACTTCATCACCTTCCTGCCGCTGGTG
CTGTTCGAGCAGTTTCGCTTCTTCCTCAACTTGTACTTCCTGCTGATGGC
GCTGTCGCAGTTCATTCCGGACATCCGGATCGGTTACCCGTACACCTACT
GGGGTCCGCTCGGCTTCGTGCTAATGGTCACCATTTGCCGAGAGGCGGTC
GACGATCTGCGTCGGCATCAGCGGGATCACGAGGTAAACTCGCAGAAGTA
CAAGAGACTGTCGTCCACCAACATCAGCGGCTACGAAATGGTTCCCAGCT
CCAAGCTGAAGGTCGGTGACGTCATAATCGTGGAAAAGAACGAGCGCGTG
CCAGCGGATCTGATCCTGCTGCGCACCAGCGATCGGAGCGGATCGGTCTT
TGTTCGTACGGACCAACTTGATGGCGAGACGGACTGGAAACCACGTCTCG
CCGTTCCGTATACTCAAAAACTCAGTCGAGATTCGGAGCTACATAGCATC
GATGCCAGTTTTTACGTGGAGAAGCCACAGAACGACATTCACAGCTTCAT
CGCCACCTTCTGCATGGCAGACGGCAGCGAAGACACCGGTCTCAGTGTGG
AGAATACCCTGTGGGCCAACACCGTCGTAGCCGCAGGAACAGCCACAGGA
ATTGTCATATATACTGGCTGCGAAACTCGCAGCGTGATGAATAACTCACA
GCCAAGGTCCAAAGTTGGACTGCTAGACATGGAGATTAACGGATTGACTA
AGGTTCTGTTCTGCGCCGTGCTTGGACTGTCGCTAGTCATGATGATGCTT
AAGGGTTTCGGCGGTCCTTGGTATAGATACATGTTCCGCTTCGTTCTTCT
CTTCTCCTACATCATTCCAATCAGTCTGCGTGTCAATTTGGACATGGGAA
AGGCGTTCTACTCATGGCAAATGCAAAACGATTCGAACATCCAGGGAACT
GTAGTGAGGTCGACCACCATACCCGAGGAATTGGGACGAATCTCTTATGT
ATTGACCGACAAGACGGGCACACTCACACAAAACGAGATGGTGTTCAAGA
AGATCCACTTGGGCATTGTATCGCACGATGCAGACACTTTCCATCACATT
GGGCAGATGATACAGAAGCTATCGGGAAACATTCTGCAACAGCAGCAGGG
TAGTTTATCGAGCTCGAGCAGCGGCGGAGACTCGACCAAGCCAATGATGT
TTGGCAACAGGATGCGTCGACCGGAGGGATGGCGGGAATGGGAGGCGGTG
CGAGCACTGGCCCTGTGCCACAATGTTACACCGGTAAGCGATGACGAGGA
CAACCGATCCGTGTCCACGGCATCGACCGTTACCGGCGGTAACAACTCGC
CAACCAAATCTGTGATAAACATCGAGGCACCTGGCAGTACGGACACAGAG
CATCAGTATCAGGCTGCGTCTCCAGACGAGATTGCACTAGTAAAGTGGAC
TGAGCAGGTGGGACTGACCCTGATTGCCAGGGATCTCAACACGATGACGT
TGCAGGTGAAGACCCCCAGCGAAGACAATGACATACTTCTGCACTATCAA
ATCTTGCAGCTTTTCCCATTCACTAGCGAGAGCAAGCGCATGGGAATTAT
AGTGCGTGAGAGCAAAACTGGTCAGATAACGTTTTATTTGAAGGGTGCCG
ACGTGGTTATGTCCAGTATTGTGCAGTACAACGACTGGCTAAGCGAGGAG
TCAGGAAACATGGCTAGAGAGGGTCTTCGCACTCTTGTTGTGGCTAAGAA
GGTTCTCACCGAGGAACAGTACTCTGACTTTGAGACGCGCTACAATGCTG
CTCGACTGAGCATCACCGATCGTGTCGCCAAAGTGGCGGCAGTCACTGAA
TCCCTCGAGCGTGAACTGGAACTGCTCTGTTTGACAGGAGTGGAGGATCG
TCTGCAGGAGAACGTGCGTCCAACGCTGGAGCTACTGCGCAATGCTGGAG
TTCGCGTTTGGATGCTAACGGGCGACAAGCTGGAGACTGCTTGCTGTATT
GCCAAGTCCTCACAGCTGATTGGTCGGAACCAGGGACTCCATGTTTTGCG
TTCCGTAAAGACGCGTACCGATGCTCACCAGGAGCTGAACAGCTTCCGGC
GTAAGCAGGGTCATGCACTGGTCATCTCAGGCGAATCCCTCGAGGTTTGC
CTGCAGTATTATAGACCAGAGTTCCTGGAGCTGGCCACGGCCTCGCCGGC
CGTCGTTTGCTGTCGCTGCTCGCCCACACAGAAAGCACAGGTGGTGGCGC
TCATACAAAAGCACACAGGCAAACGAACCTGTGCCGTGGGTGACGGTGGC
AACGATGTCAGCATGATTCAGCAGGCGGACGCTGGAGTTGGAATTGAAGG
ACGAGAGGGAAGACAAGCCTCTCTGGCCGGCGATTTTAGCATTCCGCAGT
TTTCGCACATCGCCAAGCTCCTGCTTATCCACGGTCGCAGGAGCTACAAG
CGATCGGCGGCACTATCCCAGTTCGTTATCCACCGCGGCTTGATCATAAC
CACATTGCAGGCGGTCTTTTCAGCGGTATTCTACCTCAGCTCGGTTGCTT
TGTATCAGGGCTTTCTCATGGTCGGTTACTCGACGCTGTACACTATGTTC
CCGGTGTTCTCATTAGTGCTAGATCAGGATATCACATCGGAGACGGCCGT
CACATACCCAGAGCTTTACAAGGATTTGTCAAAAGGACGCAGTCTAAGCT
ACAAGACCTTCTTTATATGGGTACTAATCAGCATATACCAAGGCGGCGTC
ATCATGTACGGAGCATTAATACTCTTTGTGGATGAGTTTATCCACATTGT
GGCGATCAGTTTCTCGGCATTAATCATGACTGAGCTCATCATGGTGGCTC
TCACCGTGCGTACTTGGCATAGGTTAATGGTGCTAGCGGAACTATTCAGT
TTAGCGCTTTATCTCATCTCATTGGCCGTGTTACATGAGTATTTCGACTG
GGAGTTTATTTGGTCGTATGATTTTCTGTGGAAGGTTTCTCTCATCACTC
TGGTCTCCTGCTTACCATTGTACATAATCAAGTTCTTGCGAAAGAAATGT
TCGCCGCCCTCTTACTTGAAGCTCTCTGCAAGCTTTCTAGACCAT

BO33331.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:05:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG31729-RA 3264 CG31729-PA 1..3261 17..3277 16305 100 Plus
CG31729-RC 3231 CG31729-PC 64..3228 113..3277 15825 100 Plus
CG31729-RB 3771 CG31729-PB 604..3768 113..3277 15825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG31729-RA 4167 CG31729-RA 299..3561 15..3277 16315 100 Plus
CG31729-RD 3999 CG31729-RD 381..3545 113..3277 15825 100 Plus
CG31729-RC 3963 CG31729-RC 193..3357 113..3277 15825 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13299395..13300741 1728..3074 6735 100 Plus
2L 23513712 2L 13297617..13298458 113..954 4210 100 Plus
2L 23513712 2L 13298557..13299333 951..1727 3885 100 Plus
2L 23513712 2L 13300931..13301062 3146..3277 660 100 Plus
2L 23513712 2L 13296646..13296745 15..114 500 100 Plus
2L 23513712 2L 13300799..13300874 3071..3146 380 100 Plus
Blast to na_te.dros performed on 2014-11-28 12:05:18 has no hits.

BO33331.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-19 11:12:04 Download gff for BO33331.complete
Subject Subject Range Query Range Percent Splice Strand
CG31729-RA 300..3560 17..3279 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:48 Download gff for BO33331.complete
Subject Subject Range Query Range Percent Splice Strand
CG31729-RA 300..3560 17..3279 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:50 Download gff for BO33331.complete
Subject Subject Range Query Range Percent Splice Strand
CG31729-RA 301..3561 17..3279 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:50 Download gff for BO33331.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13296648..13296745 17..114 100 -> Plus
2L 13297619..13298456 115..952 100 -> Plus
2L 13298559..13299333 953..1727 100 -> Plus
2L 13299395..13300739 1728..3072 100 -> Plus
2L 13300801..13300874 3073..3146 100 -> Plus
2L 13300932..13301062 3147..3279 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:48 Download gff for BO33331.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13298559..13299333 953..1727 100 -> Plus
arm_2L 13296648..13296745 17..114 100 -> Plus
arm_2L 13297619..13298456 115..952 100 -> Plus
arm_2L 13299395..13300739 1728..3072 100 -> Plus
arm_2L 13300801..13300874 3073..3146 100 -> Plus
arm_2L 13300932..13301062 3147..3279 98   Plus

BO33331.pep Sequence

Translation from 16 to 3295

> BO33331.pep
MDDATSQNSAATPMTRENIPLLNRQRNRWYLFSCWRKWFRPRELRARTVN
LGRVNTEKFPPNEIRNQKYNFITFLPLVLFEQFRFFLNLYFLLMALSQFI
PDIRIGYPYTYWGPLGFVLMVTICREAVDDLRRHQRDHEVNSQKYKRLSS
TNISGYEMVPSSKLKVGDVIIVEKNERVPADLILLRTSDRSGSVFVRTDQ
LDGETDWKPRLAVPYTQKLSRDSELHSIDASFYVEKPQNDIHSFIATFCM
ADGSEDTGLSVENTLWANTVVAAGTATGIVIYTGCETRSVMNNSQPRSKV
GLLDMEINGLTKVLFCAVLGLSLVMMMLKGFGGPWYRYMFRFVLLFSYII
PISLRVNLDMGKAFYSWQMQNDSNIQGTVVRSTTIPEELGRISYVLTDKT
GTLTQNEMVFKKIHLGIVSHDADTFHHIGQMIQKLSGNILQQQQGSLSSS
SSGGDSTKPMMFGNRMRRPEGWREWEAVRALALCHNVTPVSDDEDNRSVS
TASTVTGGNNSPTKSVINIEAPGSTDTEHQYQAASPDEIALVKWTEQVGL
TLIARDLNTMTLQVKTPSEDNDILLHYQILQLFPFTSESKRMGIIVRESK
TGQITFYLKGADVVMSSIVQYNDWLSEESGNMAREGLRTLVVAKKVLTEE
QYSDFETRYNAARLSITDRVAKVAAVTESLERELELLCLTGVEDRLQENV
RPTLELLRNAGVRVWMLTGDKLETACCIAKSSQLIGRNQGLHVLRSVKTR
TDAHQELNSFRRKQGHALVISGESLEVCLQYYRPEFLELATASPAVVCCR
CSPTQKAQVVALIQKHTGKRTCAVGDGGNDVSMIQQADAGVGIEGREGRQ
ASLAGDFSIPQFSHIAKLLLIHGRRSYKRSAALSQFVIHRGLIITTLQAV
FSAVFYLSSVALYQGFLMVGYSTLYTMFPVFSLVLDQDITSETAVTYPEL
YKDLSKGRSLSYKTFFIWVLISIYQGGVIMYGALILFVDEFIHIVAISFS
ALIMTELIMVALTVRTWHRLMVLAELFSLALYLISLAVLHEYFDWEFIWS
YDFLWKVSLITLVSCLPLYIIKFLRKKCSPPSYLKLSASFLDH

BO33331.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG31729-PA 1087 CG31729-PA 1..1087 1..1087 5592 100 Plus
CG31729-PC 1076 CG31729-PC 21..1076 32..1087 5425 99.9 Plus
CG31729-PB 1256 CG31729-PB 200..1256 31..1087 5424 99.9 Plus
CG31729-PD 994 CG31729-PD 1..994 94..1087 5089 100 Plus
CG9981-PC 1060 CG9981-PC 18..1043 52..1072 1075 28.1 Plus