BO33334.complete Sequence
1444 bp assembled on 2012-10-01
GenBank Submission: KX799365
> BO33334.complete
GAAGTTATCAGTCGACATGCATACCGTGGAAGACATGTTGGTGGAGAAAA
ACTACAGCAAGTGCCCGCTAAAAAAGCGCCCAGTTAATTACCAGTTCGAG
GCGCCTCAAAATCACAGTAACACCCCAAATGAGCCGCAGGATTTGTGCGT
AAAGAAAATGGAAATTCTGGAGGAAAATCCCTCCGAGGAACTGATCAACG
TCAGCGATTGTTGCGAGGACGAGGGTGTGGATGTAGATCATACAGATGAT
GAACACATCGAGGAGGAGGACGAGGACGTCGATGTGGATGTGGACTCGGA
CCCAAATCAGACCCAGGCTGCGGCTTTAGCTGCTGCCGCAGCTGTGGCCG
CCGCTGCAGCCGCCTCCGTGGTTGTGCCCACGCCCACATACCCGAAATAT
CCCTGGAACAACTTCCACATGTCGCCCTACACCGCCGAGTTCTACAGGAC
CATCAATCAGCAGGGTCATCAGATTTTGCCGCTGCGTGGCGATCTCATTG
CGCCCAGTTCGCCGAGTGACTCGCTGGGCTCCCTGTCGCCGCCACCACAT
CATTACCTTCATGGTCGCGCAAGCTCCGTTTCCCCGCCCATGAGATCTGA
AATCATCCATAGACCAATCGGCGTGCGGCAGCACCGTTTCCTGCCCTATC
CACAGATGCCCGGTTATCCGAGCTTGGGCGGCTATACCCATACCCATCAT
CACCATGCGCCTATCTCGCCGGCTTATTCCGAGAATTCCTACTACTCCAT
GCGATCGATGACGCCTGAATCCAGCTGCAGCTCCTCGCTGCCCGAGGATC
TATCCCTGAAACACAAGAACCTGAACTTGAATCTAAACACTAGCCAGCCG
GGAGAGCAAGCAGCAGCCAAAACCGGGGATATGTCGCCCGAAACTATGCC
GAATGCCTCCGCCAAGAAGGACAAGAACCAGCCGCCGCGTTACCAGTGCC
CGGATTGCCAGAAATCTTACTCCACCTTCTCCGGGCTGACCAAACATCAG
CAGTTCCATTGCCCGGCCGCCGAGGGTAATCAGGTGAAGAAGTCCTTCAG
CTGCAAGGATTGTGACAAGACCTATGTTTCGTTGGGTGCCCTCAAGATGC
ACATTCGCACCCACACGTTGCCCTGCAAGTGCAATCTGTGCGGCAAGGCC
TTCTCGCGACCATGGCTGCTGCAAGGACACATTCGCACTCATACGGGAGA
GAAGCCCTTCAGTTGCCAGCATTGCCACCGGGCCTTTGCAGATCGCTCGA
ATCTGCGAGCACATCTGCAGACCCACTCGGACATCAAGAAGTACTCCTGC
ACCAGTTGCTCGAAGACCTTCTCGCGGATGTCCCTCCTAACCAAGCATTC
GGAGGGCGGATGTCCTGGCGGCAGTGCAGGATCCTCCAGCAGCAGCGAAC
TCAACTACGCCGGCTATGCCGAGCCGGCAAGCTTTCTAGACCAT
BO33334.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| esg-RA | 1413 | CG3758-PA | 1..1410 | 17..1426 | 7035 | 99.9 | Plus |
| wor-RA | 1647 | CG4158-PA | 1026..1439 | 934..1347 | 870 | 80.7 | Plus |
| sna-RA | 1173 | CG3956-PA | 793..1092 | 1001..1300 | 555 | 79 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:28:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| esg-RA | 2273 | CG3758-RA | 229..1638 | 17..1426 | 7035 | 99.9 | Plus |
| wor-RA | 2222 | CG4158-RA | 1176..1589 | 934..1347 | 870 | 80.7 | Plus |
| sna-RA | 1668 | CG3956-RA | 946..1245 | 1001..1300 | 555 | 79 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:28:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15334094..15335503 | 17..1426 | 7035 | 99.9 | Plus |
| 2L | 23513712 | 2L | 15423930..15424343 | 1347..934 | 870 | 80.7 | Minus |
| 2L | 23513712 | 2L | 15477016..15477315 | 1300..1001 | 555 | 79 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:28:10 has no hits.
BO33334.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-01 14:45:15 Download gff for
BO33334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esg-RA | 231..1640 | 17..1428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:54:17 Download gff for
BO33334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esg-RA | 229..1638 | 17..1428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:54 Download gff for
BO33334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esg-RA | 229..1638 | 17..1428 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:54 Download gff for
BO33334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15334094..15335503 | 17..1428 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:54:17 Download gff for
BO33334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15334094..15335503 | 17..1428 | 99 | | Plus |
BO33334.pep Sequence
Translation from 16 to 1444
> BO33334.pep
MHTVEDMLVEKNYSKCPLKKRPVNYQFEAPQNHSNTPNEPQDLCVKKMEI
LEENPSEELINVSDCCEDEGVDVDHTDDEHIEEEDEDVDVDVDSDPNQTQ
AAALAAAAAVAAAAAASVVVPTPTYPKYPWNNFHMSPYTAEFYRTINQQG
HQILPLRGDLIAPSSPSDSLGSLSPPPHHYLHGRASSVSPPMRSEIIHRP
IGVRQHRFLPYPQMPGYPSLGGYTHTHHHHAPISPAYSENSYYSMRSMTP
ESSCSSSLPEDLSLKHKNLNLNLNTSQPGEQAAAKTGDMSPETMPNASAK
KDKNQPPRYQCPDCQKSYSTFSGLTKHQQFHCPAAEGNQVKKSFSCKDCD
KTYVSLGALKMHIRTHTLPCKCNLCGKAFSRPWLLQGHIRTHTGEKPFSC
QHCHRAFADRSNLRAHLQTHSDIKKYSCTSCSKTFSRMSLLTKHSEGGCP
GGSAGSSSSSELNYAGYAEPASFLDH
BO33334.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:53:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| esg-PA | 470 | CG3758-PA | 1..470 | 1..470 | 2566 | 100 | Plus |
| wor-PA | 548 | CG4158-PA | 329..496 | 296..460 | 723 | 75.6 | Plus |
| sna-PA | 390 | CG3956-PA | 153..385 | 231..449 | 653 | 55.4 | Plus |
| Kah-PA | 442 | CG17181-PA | 121..269 | 311..460 | 451 | 54.2 | Plus |
| CG12605-PC | 474 | CG12605-PC | 265..430 | 276..449 | 443 | 49.4 | Plus |
