BO33366.complete Sequence
3814 bp assembled on 2012-09-21
GenBank Submission: KX797434
> BO33366.complete
GAAGTTATCAGTCGACATGCCCAGGATGGGGAGACGTCACAAACACTGCC
ATCATCGGTTGTGCGCTTCATCTTCATCTCCGCTGCAGCGGCTGGTGGAG
CTGCAGCTCCTTCTGCCGGCGCTCTTGGTCGTCCTGCTGGCCACCACTCT
GGGACTTGCCTGCCGTGTCTCCGAGTTCTCCTGCAAGGGCAGCGGGAACA
GCGGCACCATCTGCGTGCCCCTGGACAAATACTGCGACGGACGCAGCGAT
TGCGCCGATGGCAGCGATGAACCCAAACATTGCTCCGTCTGCAATCGTAC
ATATTATGGGGATATCGGACGCACCTATGCCATAAAAGTGCCAACGCCAC
AGTGGAATAAATTGCCCTTCCTCTGTCACTTGACATTCACAGCATCCGGT
CATGATCAAGGCGACATTGTGCAGATTATCTTCGATGGCTTCACGGTGGG
AAGGTTCGACGAGGGCATGGTCGACACGGATGTGGATGGTTACGAAACGA
ACCTCAGTCCCACGGGCGAATTGCCAGGATGTCCCGAGGGCTTCATGCAG
CTCAGCGAATTGGGACGCCCATTCACCGGCGGCTCCTGGTGCGGCAAGGC
CACCGGACCGCAATTGTACTTTAGCGAAACATCCACGGTGACAGCTTCGG
TGAAGGTATTTCATCCGCCACGCAATATCCGAGACGAGAAGCCCTTTGAG
TTCAGCATAAGATATAAATTTATAAGCCAGTCGGATGCAGTTGTGAGATA
CGGCCTGCCCGATAAGCCGCTCGAACTGGGCCGTGTGACACCCGGCACCT
ATTGTACCAGGCAATTCGACGAGTGCTATCGGAACAAGTGTCGCCTGCAA
AGTCCAAATTATCCTGGCATGTATCCGAGGAACGTTACCTGCTACTGGAC
GATCCGGCAGAAGGAAGTCCCGACCAGCAAGCACGCCATGATTGCCGTTA
GCCAGGAAAATCAGCACAAGGCCTTGGTAAAACGCTCAATAGCCAGCTTT
AATAAAACATCCCGGTCCATTCGAGCCTGGTCGGACTGTACAGGTGAACG
GGACCATTTGATTTTCTACGACGGCAGTTCCACCAACGATCCTGTTTTGG
CCAAATACTGCGGAGGAGATTGGTTGCCACGCGTCGTTTCACGAGGTCCT
GAGATGTTGGTGGCCTTCCACTCCAGCCCGTTTTCTGCGCCCTTGCAGCA
GGGCATCCCGAACCGAGGCTTCGAACTGGACGTGGACATACTCTTCACCG
ACTCCGACTCATTTGACTTCGCGCAGGGCACCAAGAACCTGTGCGAATTT
CACATAAATGCCTCGAATCCAGATGATGTGCTATTCTCGCGGCGCGGCCG
CATGGGACGCATTGTGAGTCCGCGTCACACGCTTCCGCCGAATACGACAT
GCACGTACCACTTTCACGGATATCCTGGTGACCTGATTTGGTTATCGTTC
ACCAGCTACAATCTGCAGATCCTGCAGCAGGCGATACACGACAACAATAC
GCTGGGACGGAGCGATCTGCCACCTTGGATAACGCGCCTGAGGATGTGGG
ACAGCTATGGCACATATGTGCCCATGAAATCGACAAGTTCAACCACCGGC
CAACCGCCACCGCCACCCCCCGTTGCCTCATCGGCGGACGGGGGCAAGCC
AACCCTCCTAAACCAGAGCAACTACGGCAGCTACTACTACAGCGCCAGCA
ATCCGAAGCTGAATCGGAATCTGCGAGTGAACATCGACAATGCCTGGAAT
CCGGTGGACACCTACATCTACGGCCCCACGCAGTCGAGTGTGTTCAACCA
GGAGAACAAGTACAGCGGCTATCAGGGTGGAGGTCCTGGCGGAGGATCGA
CTGGATCCGCTGGCTCCGGCAAGACAATCTCCGGGGTCAAGGACAGCCTC
AACTACATTTCCAGCGGCAAGTCCTCCAAGGAAGTCTCGGCAGCTGCCGT
CGTCAGCTCGGATCGCAATAGTGCAGTGGCCCTGATGAGCACCAAGGGCA
AGCGTCGCCTCATGCTGGAGATCTACGACTACGAGACTCCGAAGCTGTGC
GATCACACTGCCATCGGAAGTGGAGTGAGCGGAAGTAGTGCCGTGATGGG
GGGCAATAAGCAGAGACCCTGCAGTCCGCTGGAGAGCTACGTGAGCACCG
GAAGGGATTTGAAACTGGAGTTCCACACGCATACCGGCACCGCCCTGTTT
CCCGCTCAGTTTGCTCTGAACTACGAGTTTGTGGACACGGAGCAGGGCGG
CGAGACGTGGGCGGGAAGACGGGGAGAAGATCCGGTTCCGCCACTCTGCT
CAAGAATTTTCAAGAAGCGTAAGGGCAACATTCAGGTTCCCAGGAATGTG
TTTCTGTACGGACGAGGCGGAGCCAAGAACATAACCTGCTTGTATCGCTT
TGAAGCGGGTCCTTCGGAGAGGGTGAAACTGGTCCTGCATAACGTGTCCT
TCGGAGAAGGTACAGCCTGTACCACTGACTCGGATCTGCATACAGGCAGA
CCCCGCTGCAATCAACTGGATCCGGAGGGCCGCATCACGGAGCTGCGACT
GTTCGATGTTCCATTTAGGGACGTGAAAATCCAACTGGGCTGCTTCTGCG
ATAACTCCAGTGCCTTGTACAGCAATGCACCGCTCACTTTCGTTTCGCAT
TCGAGGATTATGGAGCTGTCCTTCACGGTCACGAGATTAAATATATCGGA
GGACTTTGCGGATGTCTTCTTCTCGGCTTCCTACGAATTCAAGAGACAAC
CGGACTGCAGGAAGCAGTTGAAACTCAAAGGAGCCGGAGGGGAGGACGAA
CTCAAGTATCCTCTTAAGACTCAGGACGCAAGCTGTGAAGGCCTGGCCTG
GTACATCGAAGCACAATCGGCCGAGAGGTCACTCTTCGTTCAGACCTGGG
GCGCCTATCTGCCCGTGGATCCCACCTCCGAGGATGCCATGCGGTGTCAC
ACCAAGAACCGCTTGATGATTTACTCCGGACGACCCCTGCGACCCATGAG
GGTGGTGTGCCCGGCACAAAGTGGTCCGCGGCCAATGTCGCTGCACATCT
TCTCCGAGGACTGGACCAATGGACAGCCCTTGTTCATGAACAAACCCATC
AGCCTAGTGCTGGAGCCAATCCTGAAGGAGCCCGGCGACATCTCCTTTAC
GTGGCTCGAGATTCACCGCACCAAGAACGCGCTGCTGCAGCAGTTGGACC
TGCATGTGAACGCTAGCGTGACCACGGGCATGGGCTCCCAGACCTCCTCC
CAGTCCGCAGCCGGCTCCAACACGGGCATTGGGGGACTGGGCACCAGTGG
GTCAGGATCTGCTGCCAATGCCGGGGGCTCTGCTGGCGGAGCAACGGCCA
ACGAGACGCTGAACGAGTTCGGATTCTTTCCCAAGGAGTCCGACTGCGAA
TACAAATGTCCTGAAATTGATGCATGCATTGCGGCCAGCTTGTGGTGCGA
TGGCCACCACAACTGCCCCAGTGGTTTCGATGAGTCGGAGGAGGAGTGCG
GCACCGCTCGCAAGTTGCTGGAACTGCCAGGCGGAGTTTTCGCCGCCCTT
GGATGCATTGCAGCAGCCCTGACCGCCTGCCTGATATTCTGCATGTTCGG
CCTGATGAGGAAGCGGAAAAAGTCGGTGGTGCAGAAGGGCGCCGGAGTGG
GCGGCATGGGCGGAATGGGAGTGGGTGGGATGGGCGTGGGCATCGGGTTC
ATGAACGGAGCGAGCAACGGCAACGTGTCCGCCGCCAGCATCGGTACCTT
GAAGAAGGACTTCAAGAAGGAGGCGCTGTACATCGATCCGGCCTCCGCAA
GCTTTCTAGACCAT
BO33366.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32206-RB | 3783 | CG32206-PB | 1..3780 | 17..3796 | 18900 | 100 | Plus |
| CG32206-RE | 3837 | CG32206-PE | 1..3780 | 17..3796 | 18900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:06:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32206-RB | 7272 | CG32206-RB | 540..4319 | 17..3796 | 18900 | 100 | Plus |
| CG32206-RE | 7272 | CG32206-RE | 540..4319 | 17..3796 | 18900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:06:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19347872..19348804 | 3093..2161 | 4665 | 100 | Minus |
| 3L | 28110227 | 3L | 19350234..19350885 | 2161..1510 | 3260 | 100 | Minus |
| 3L | 28110227 | 3L | 19345351..19345710 | 3453..3094 | 1800 | 100 | Minus |
| 3L | 28110227 | 3L | 19343274..19343618 | 3796..3452 | 1725 | 100 | Minus |
| 3L | 28110227 | 3L | 19385855..19386125 | 287..17 | 1355 | 100 | Minus |
| 3L | 28110227 | 3L | 19372166..19372404 | 984..746 | 1195 | 100 | Minus |
| 3L | 28110227 | 3L | 19355391..19355583 | 1510..1318 | 965 | 100 | Minus |
| 3L | 28110227 | 3L | 19364620..19364799 | 1322..1143 | 900 | 100 | Minus |
| 3L | 28110227 | 3L | 19371086..19371245 | 1143..984 | 800 | 100 | Minus |
| 3L | 28110227 | 3L | 19385398..19385535 | 424..287 | 690 | 100 | Minus |
| 3L | 28110227 | 3L | 19381372..19381500 | 550..422 | 645 | 100 | Minus |
| 3L | 28110227 | 3L | 19374734..19374844 | 657..547 | 555 | 100 | Minus |
| 3L | 28110227 | 3L | 19373492..19373585 | 747..654 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:06:27 has no hits.
BO33366.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-21 17:40:21 Download gff for
BO33366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32206-RB | 520..4299 | 17..3798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:05 Download gff for
BO33366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32206-RE | 540..4319 | 17..3798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:57:13 Download gff for
BO33366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32206-RE | 540..4319 | 17..3798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:57:13 Download gff for
BO33366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19372166..19372402 | 748..984 | 100 | <- | Minus |
| 3L | 19373492..19373583 | 656..747 | 100 | <- | Minus |
| 3L | 19374736..19374840 | 551..655 | 100 | <- | Minus |
| 3L | 19381372..19381497 | 425..550 | 100 | <- | Minus |
| 3L | 19385398..19385534 | 288..424 | 100 | <- | Minus |
| 3L | 19385855..19386125 | 17..287 | 100 | | Minus |
| 3L | 19364620..19364798 | 1144..1322 | 100 | <- | Minus |
| 3L | 19371086..19371244 | 985..1143 | 100 | <- | Minus |
| 3L | 19343270..19343617 | 3453..3798 | 99 | <- | Minus |
| 3L | 19345352..19345710 | 3094..3452 | 100 | <- | Minus |
| 3L | 19347872..19348803 | 2162..3093 | 100 | <- | Minus |
| 3L | 19350234..19350884 | 1511..2161 | 100 | <- | Minus |
| 3L | 19355391..19355578 | 1323..1510 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:05 Download gff for
BO33366.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19336370..19336717 | 3453..3798 | 99 | <- | Minus |
| arm_3L | 19338452..19338810 | 3094..3452 | 100 | <- | Minus |
| arm_3L | 19340972..19341903 | 2162..3093 | 100 | <- | Minus |
| arm_3L | 19343334..19343984 | 1511..2161 | 100 | <- | Minus |
| arm_3L | 19348491..19348678 | 1323..1510 | 100 | <- | Minus |
| arm_3L | 19357720..19357898 | 1144..1322 | 100 | <- | Minus |
| arm_3L | 19364186..19364344 | 985..1143 | 100 | <- | Minus |
| arm_3L | 19365266..19365502 | 748..984 | 100 | <- | Minus |
| arm_3L | 19366592..19366683 | 656..747 | 100 | <- | Minus |
| arm_3L | 19367836..19367940 | 551..655 | 100 | <- | Minus |
| arm_3L | 19374472..19374597 | 425..550 | 100 | <- | Minus |
| arm_3L | 19378498..19378634 | 288..424 | 100 | <- | Minus |
| arm_3L | 19378955..19379225 | 17..287 | 100 | | Minus |
BO33366.pep Sequence
Translation from 16 to 3814
> BO33366.pep
MPRMGRRHKHCHHRLCASSSSPLQRLVELQLLLPALLVVLLATTLGLACR
VSEFSCKGSGNSGTICVPLDKYCDGRSDCADGSDEPKHCSVCNRTYYGDI
GRTYAIKVPTPQWNKLPFLCHLTFTASGHDQGDIVQIIFDGFTVGRFDEG
MVDTDVDGYETNLSPTGELPGCPEGFMQLSELGRPFTGGSWCGKATGPQL
YFSETSTVTASVKVFHPPRNIRDEKPFEFSIRYKFISQSDAVVRYGLPDK
PLELGRVTPGTYCTRQFDECYRNKCRLQSPNYPGMYPRNVTCYWTIRQKE
VPTSKHAMIAVSQENQHKALVKRSIASFNKTSRSIRAWSDCTGERDHLIF
YDGSSTNDPVLAKYCGGDWLPRVVSRGPEMLVAFHSSPFSAPLQQGIPNR
GFELDVDILFTDSDSFDFAQGTKNLCEFHINASNPDDVLFSRRGRMGRIV
SPRHTLPPNTTCTYHFHGYPGDLIWLSFTSYNLQILQQAIHDNNTLGRSD
LPPWITRLRMWDSYGTYVPMKSTSSTTGQPPPPPPVASSADGGKPTLLNQ
SNYGSYYYSASNPKLNRNLRVNIDNAWNPVDTYIYGPTQSSVFNQENKYS
GYQGGGPGGGSTGSAGSGKTISGVKDSLNYISSGKSSKEVSAAAVVSSDR
NSAVALMSTKGKRRLMLEIYDYETPKLCDHTAIGSGVSGSSAVMGGNKQR
PCSPLESYVSTGRDLKLEFHTHTGTALFPAQFALNYEFVDTEQGGETWAG
RRGEDPVPPLCSRIFKKRKGNIQVPRNVFLYGRGGAKNITCLYRFEAGPS
ERVKLVLHNVSFGEGTACTTDSDLHTGRPRCNQLDPEGRITELRLFDVPF
RDVKIQLGCFCDNSSALYSNAPLTFVSHSRIMELSFTVTRLNISEDFADV
FFSASYEFKRQPDCRKQLKLKGAGGEDELKYPLKTQDASCEGLAWYIEAQ
SAERSLFVQTWGAYLPVDPTSEDAMRCHTKNRLMIYSGRPLRPMRVVCPA
QSGPRPMSLHIFSEDWTNGQPLFMNKPISLVLEPILKEPGDISFTWLEIH
RTKNALLQQLDLHVNASVTTGMGSQTSSQSAAGSNTGIGGLGTSGSGSAA
NAGGSAGGATANETLNEFGFFPKESDCEYKCPEIDACIAASLWCDGHHNC
PSGFDESEEECGTARKLLELPGGVFAALGCIAAALTACLIFCMFGLMRKR
KKSVVQKGAGVGGMGGMGVGGMGVGIGFMNGASNGNVSAASIGTLKKDFK
KEALYIDPASASFLDH
BO33366.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:45:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32206-PB | 1260 | CG32206-PB | 1..1260 | 1..1260 | 6769 | 100 | Plus |
| CG32206-PE | 1278 | CG32206-PE | 1..1260 | 1..1260 | 6769 | 100 | Plus |
| CG32432-PB | 1297 | CG32432-PB | 214..388 | 49..246 | 458 | 44 | Plus |
| CG32432-PA | 1307 | CG32432-PA | 214..388 | 49..246 | 458 | 44 | Plus |
| CG32432-PB | 1297 | CG32432-PB | 481..701 | 254..468 | 431 | 39.5 | Plus |
| CG32432-PA | 1307 | CG32432-PA | 481..711 | 254..468 | 412 | 37.9 | Plus |
| CG32432-PB | 1297 | CG32432-PB | 817..1180 | 675..1049 | 375 | 29 | Plus |
| CG32432-PA | 1307 | CG32432-PA | 827..1190 | 675..1049 | 375 | 29 | Plus |
| CG34370-PH | 952 | CG34370-PH | 138..441 | 172..490 | 292 | 27.5 | Plus |
