Clone BO33373 Report

Search the DGRC for BO33373

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:333
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptCG11426-RA
Protein status:BO33373.pep: Imported from assembly
Sequenced Size:1054

Clone Sequence Records

BO33373.complete Sequence

1054 bp assembled on 2012-08-22

GenBank Submission: KX795206

> BO33373.complete
GAAGTTATCAGTCGAAATGCGCGACGCACCAGAAGATCAGTCCGTAACGG
TTTCCATGCCGGCATCTGCATCCGGCTCTGCCGCCGGCTCCACGGGACCG
TCATCGGATCGCCGGATGACGCAGCGCCTGCTCGTGGAGCTCCTGGTGGT
GGTGGTGCTCGTCATTCCCATCTGCGTGTACGAGTTCGCGGTGGATCCCG
TGCGACGCGGCTTTTTCTGCGACGACGAGAGCATCAGCTATCCATTCCAG
GACAACACCATAACGCCGGTAATGCTCGGCCTGATCGTGGGCCTGCTTCC
GGCCCTGGTCATGGTGGTGGTGGAGTACGTTAGCCACCTGCGCGCCGGAG
ACATCTCGGCCACGGTGGATCTGCTTGGCTGGAGGGTATCCACATGGTAC
GTGGAGCTGGGCCGGCAGTCCACCTACTTCTGCTTTGGCCTGCTGCTCAC
CTTTGACGCTACCGAGGTGGGCAAGTACACCATCGGACGCCTGAGACCGC
ACTTCCTGGCCGTTTGCCAGCCGCAGATTGCGGATGGGAGCATGTGCTCC
GATCCGGTCAACCTGCACCGCTACATGGAGAACTACGACTGCGCCGGCGA
GGGCTTCACCGTGGAGGACGTGCGACAGGCCCGCCTCAGCTTTCCCAGCG
GTCACTCTAGTTTGGCCTTCTATGCCATGATCTACGTGGCACTCTACCTC
CAGCGGAAGATCACCTGGCGGGGATCGAAGCTGAGCCGGCACTTTGTGCA
GTTCGCAGTGGTGATGGTAGCCTGGTATACGGCCCTCAGCCGTGTAATGG
ACCATTGGCACCACTGGTCCGACGTCCTTTCCGGATCGCTACTTGGCGTG
GCTGGCGCTCTAATCACCGCCCACTATATAGCAAGGATGTTCGACGACGG
GGCAAGCAATATTCTAAGCGGTGGCCTGAGGAGGGAAAACACAGCGGCCA
CTCTGCAGGAAGAGGTCTGCCCCACCACTCCCCCGCCGTACTCCGTGAAC
AACAGCTTCAGCGAGGATCAGTACTGCTCTAAGGTTGCAAGCTTTCTAGA
CCAT

BO33373.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11426-RA 1023 CG11426-PA 1..1020 17..1036 5100 100 Plus
wun-RC 1095 CG8804-PC 790..1005 632..847 210 73.1 Plus
wun-RA 903 CG8804-PA 553..768 632..847 210 73.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG11426-RA 1882 CG11426-RA 588..1610 14..1036 5115 100 Plus
wun-RC 1563 CG8804-RC 1172..1387 632..847 210 73.1 Plus
wun-RA 1626 CG8804-RA 772..987 632..847 210 73.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22472215..22473237 14..1036 5115 100 Plus
Blast to na_te.dros performed on 2014-11-28 12:27:19 has no hits.

BO33373.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:32 Download gff for BO33373.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 589..1608 17..1038 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:23 Download gff for BO33373.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 591..1610 17..1038 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:36 Download gff for BO33373.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 591..1610 17..1038 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:36 Download gff for BO33373.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22472218..22473237 17..1038 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:23 Download gff for BO33373.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22465318..22466337 17..1038 99   Plus

BO33373.pep Sequence

Translation from 16 to 1054

> BO33373.pep
MRDAPEDQSVTVSMPASASGSAAGSTGPSSDRRMTQRLLVELLVVVVLVI
PICVYEFAVDPVRRGFFCDDESISYPFQDNTITPVMLGLIVGLLPALVMV
VVEYVSHLRAGDISATVDLLGWRVSTWYVELGRQSTYFCFGLLLTFDATE
VGKYTIGRLRPHFLAVCQPQIADGSMCSDPVNLHRYMENYDCAGEGFTVE
DVRQARLSFPSGHSSLAFYAMIYVALYLQRKITWRGSKLSRHFVQFAVVM
VAWYTALSRVMDHWHHWSDVLSGSLLGVAGALITAHYIARMFDDGASNIL
SGGLRRENTAATLQEEVCPTTPPPYSVNNSFSEDQYCSKVASFLDH

BO33373.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:24:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11426-PA 340 CG11426-PA 1..340 1..340 1779 100 Plus
wun-PA 300 CG8804-PA 3..271 30..292 651 43.9 Plus
wun-PB 379 CG8804-PB 82..350 30..292 651 43.9 Plus
wun-PC 364 CG8804-PC 82..344 30..286 632 43.7 Plus
wun2-PA 350 CG8805-PA 69..344 13..283 556 39.8 Plus