BO33381.complete Sequence
2074 bp assembled on 2012-10-01
GenBank Submission: KX797486
> BO33381.complete
GAAGTTATCAGTCGACATGAGCCTGAAGTCCAGTGCTAGGATCAAAAAAC
GCCGCTCGGAGGCAGCGGCGGCCACCTATCCGGTACCATCAGCTCCGGCT
CAAACGGTGAGCAACGGCTCAGCTGCCACAGCGAATCCTGCGAGTGCCAC
GAGCACTCCAGGAAATGGTGCCACAAATCCTTGCCAGAGCTCGTCCAAGA
AACAAAGCTTCGTGGGACGCAATCCCAACTTCGATACCGATGAAACCAAG
CTGCTCATCCAGTTGTGGGGCGATCCCAAACTGCAGAGAACCCTAATCAC
CACGCACAAAAAGCACGCCGTGATCTGTCAACTGGCCGCCAAGATGCAGG
AGTATGGCTACCATCGTTCGCCAGAGGAGATTACTACACGGATTAAGAAC
CTCAAGTGCTTCTACAATCGCTTGAAGAAGGACAAGGAGTGCGGCGGTCA
GTCCACCGATTCGGAGCCCAGCTGGAAACACTTTGCCGAGATGGACGCCA
TTATGACCAGACCCATTTTCAGTGTGCGTCCCAATGAGGTGCCTGCTCCA
TCGCTCAAATACCAACTGGAGCAGGCCCTGGAGGAGCATGCCGAACGACG
CAAGCGGCGGCTGGCGAACGGAGAGGAGCTATCCGAAAGCGACAACGAGG
AGGATGATATGCTGCTCTCCGCTCTGGTCAGCAAAAACAAGGATACTGGC
GGCCGAAAGGAACTGGAAGCTGGCTGCCTAGAAGCCGACAGCGATATGAA
CGAGGAATCCTTCTCAAAGCGTCGCAAGGTGTCCGCTGATGTAGAGGTTG
ATATAGGAGAAGCACTGACTTCGCCGTGCATCAAAATCGAGCCAGGCCAG
GAAGTTGAAACAGCAGCAGCAACTTCCACCGTAGAGCCCCAACAGGAGGA
GGAGGACGATGACTGCATGATTCTGCCACAGCCCAAGGAAGAACCCATCG
ATGTGGATGCCGCTGATGATCCACCAATTGAGAAGTCATCAAGTTCCACT
ACTAATACATCCACTTTGGCTGACATGTTACAGGGTAACAAACCGTCGAA
TCTGCTTCCTTTCACCGGGGCCAATGTCATCATTCCGGCCAGCATTACCA
CGACTACGGCTGGCACAAGCGCGACCACGCAAAGTTCAACGACAACGTCT
AGCAAACTTCAGGGCGGTAAAATCTCGTTGGTGCCAGCGAATTTCCTGAT
GCAATCAAAGCTGCCGGCTGCCGCAGGACCAAGTCCCATGGCAAACGCCA
AGGGAGCTGCGCCCCAAATCCAGCTGCTGCAGAGTGCCATCAATCAGGGG
GCTCGTCTGATGATTAGCGGATCGGCAGCAGCACCGGCACAGCCTAGCAA
CGCCGGTTTGGTGGCCACAGCCCCCGGAGGAGTCAAGTTCGTGCTGGTCA
ATGCTGAGCAGGCCAAGGCGGCTGCAGCGGCTGCTGCTGTGGGTAAATCG
ACCGCCTCGTTGCCCTTGTCCACTGCCCAAGCTCAGGTGCAGGCCGCTGT
TCAGCAGCAGCAGCAGAAACTACATCAGAGCCTGCAGCAGGAGCAGCACC
ATCAGCAGCACATTCAACTGGAGAAGGAGGAGAGTCGCCATGATCACGAG
AAAGGTAGGAAGGATCTGCAAACGAAGAGACACATGACATCAATGAGAAT
CCTTCTTCGTCAGTTGCTGAACTCGCAAAACGAAGCCAACGAGATCCAAC
ACAATCGTTTATCCCTGGAACGCGAGCGCCTGGACTGGGAGAAGTCTATG
GGCGAGCGTCTGTTAAACCTGTTGCCAAGTCTCATGCAGCCGCCACCTGC
AGCCTCGCCATGCTCCACGGCTCAACGTCTTCAGCCGCCCAAGCTGCTCT
TCACAACTGCTCTGCCAATGGGCAATGGCACCGTCACCATGCCGCACATC
CTAACATCCAATTCGCTGCCAAAAGTGATTACCACTTCAAGTTGCAACAG
CGGCGTGGCAGTGGCCGGATCAGGAGTGGGCCTAGTAGCCAGTGTGGCCC
CCAAGCCGGTAGATAACGACGTCCAGTTGATTTCGCCCAAGCTGGAAAAG
GAGATCGCAAGCTTTCTAGACCAT
BO33381.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10151-RD | 2043 | CG10151-PD | 1..2040 | 17..2056 | 10200 | 100 | Plus |
| CG10151-RC | 2007 | CG10151-PC | 1..1588 | 17..1604 | 7940 | 100 | Plus |
| CG10151-RB | 2007 | CG10151-PB | 1..1588 | 17..1604 | 7940 | 100 | Plus |
| CG10151-RC | 2007 | CG10151-PC | 1589..2004 | 1641..2056 | 2080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10151-RD | 2389 | CG10151-RD | 211..2251 | 16..2056 | 10205 | 100 | Plus |
| CG10151-RC | 2223 | CG10151-RC | 81..1669 | 16..1604 | 7945 | 100 | Plus |
| CG10151-RB | 2353 | CG10151-RB | 211..1799 | 16..1604 | 7945 | 100 | Plus |
| CG10151-RC | 2223 | CG10151-RC | 1670..2085 | 1641..2056 | 2080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:28:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14753951..14755575 | 1640..16 | 8125 | 100 | Minus |
| 2R | 25286936 | 2R | 14753475..14753890 | 2056..1641 | 2080 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:28:05 has no hits.
BO33381.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-01 14:45:14 Download gff for
BO33381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10151-RD | 322..2361 | 17..2058 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:54:16 Download gff for
BO33381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10151-RD | 322..2361 | 17..2058 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:04:53 Download gff for
BO33381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10151-RD | 212..2251 | 17..2058 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:04:53 Download gff for
BO33381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14753472..14753890 | 1641..2058 | 99 | <- | Minus |
| 2R | 14753951..14755574 | 17..1640 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:54:16 Download gff for
BO33381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10640977..10641395 | 1641..2058 | 99 | <- | Minus |
| arm_2R | 10641456..10643079 | 17..1640 | 100 | | Minus |
BO33381.pep Sequence
Translation from 16 to 2074
> BO33381.pep
MSLKSSARIKKRRSEAAAATYPVPSAPAQTVSNGSAATANPASATSTPGN
GATNPCQSSSKKQSFVGRNPNFDTDETKLLIQLWGDPKLQRTLITTHKKH
AVICQLAAKMQEYGYHRSPEEITTRIKNLKCFYNRLKKDKECGGQSTDSE
PSWKHFAEMDAIMTRPIFSVRPNEVPAPSLKYQLEQALEEHAERRKRRLA
NGEELSESDNEEDDMLLSALVSKNKDTGGRKELEAGCLEADSDMNEESFS
KRRKVSADVEVDIGEALTSPCIKIEPGQEVETAAATSTVEPQQEEEDDDC
MILPQPKEEPIDVDAADDPPIEKSSSSTTNTSTLADMLQGNKPSNLLPFT
GANVIIPASITTTTAGTSATTQSSTTTSSKLQGGKISLVPANFLMQSKLP
AAAGPSPMANAKGAAPQIQLLQSAINQGARLMISGSAAAPAQPSNAGLVA
TAPGGVKFVLVNAEQAKAAAAAAAVGKSTASLPLSTAQAQVQAAVQQQQQ
KLHQSLQQEQHHQQHIQLEKEESRHDHEKGRKDLQTKRHMTSMRILLRQL
LNSQNEANEIQHNRLSLERERLDWEKSMGERLLNLLPSLMQPPPAASPCS
TAQRLQPPKLLFTTALPMGNGTVTMPHILTSNSLPKVITTSSCNSGVAVA
GSGVGLVASVAPKPVDNDVQLISPKLEKEIASFLDH
BO33381.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10151-PD | 680 | CG10151-PD | 1..680 | 1..680 | 3438 | 100 | Plus |
| CG10151-PC | 668 | CG10151-PC | 1..668 | 1..680 | 3348 | 98.1 | Plus |
| CG10151-PB | 668 | CG10151-PB | 1..668 | 1..680 | 3348 | 98.1 | Plus |
| CG10151-PA | 668 | CG10151-PA | 1..668 | 1..680 | 3348 | 98.1 | Plus |
