BO33382.complete Sequence
1285 bp assembled on 2013-01-22
GenBank Submission: KX799189
> BO33382.complete
GAAGTTATCAGTCGACATGAAAATCCATTTTCGGGAACAGTACGGAAGAA
AGGGGGAGGAAATCCTCTATGTGACGCCAGCAGATCAGAGCAACATTGTG
CGTGTGCCGCTGCGTGGGGATAAGCTGGTCATCCAGGAGAAGTTCCTGCT
GTTTCGCGTGCTGCAGAAGGTCTTCCTGCCCAAGGGCTATCCGGATAGTG
TCAGCGAGGACTATGCAGCATACCAGATCTGGGACACGGCCCAGGCCTTC
TGCAGCACCATCTGCGGCACCCTGTGCACACACGCCATCTTGAAGGGCAT
CGGCGTGGGCAGCGAAAACATCAATGCCTTTTCCGCAACGGCGACTTGGA
TCTTGAAGGAGGGCAGTGGTCACGTGGGTCGCATTGTGTTCGCATGGTGG
CAGGGCTCCCAATTGGATGTGGACTCAAAGAAATGGCGCCTGCGTGCGGA
TTTTCTGAACGATCTGGCCATGGGCATCGAGATCTACGTGCTTCCCAAGT
ATCCGCATTTCAGCACCCAAATCCTGTGCTGCTCGACCCTGCTGAAGGCG
ATTGTGGGCGTTGCCGGAGGTGCCACTAGATCGGCATTGACCCAGCATCA
TGCCTTGAGGGGCAACCTGGCCGATGTGGCATCCAAGGACAGTTCACAGG
AGACGTGCGTGAATCTGGTGGCCTCCTTTGTGGGCCTGTATCTCCTCTCG
CTGATCAAGAGTCAGGCGGTCCTGTATACCATATTCTACGTGGTGGTCAG
CCTGCATCTGTATGCCAATCTGAAAGCAGTACGCGCAGTATGCTTGCGAA
GCTTCAACGAGTCGCGCTATTTGATCGCCCTGGAGGAGTTTTTCAGGTCG
TCAAGGATGCTCAGTCCGCAGCAGGTGAACGCCATGGAGCGTGTGACGGT
TGGCCAAACGGTTTCAGTGTCACTGAACATAAAGCTCGGACTGAGCGTTA
AAAATTTGATTGACGAGTACAAGAGCAGCAGCGTTATTGAGAACATAGTG
TCCTCCTTCGATCCCCACGAGCACTTCATCATCGCACAGACCAAAAAGTG
TCTGGGTGTATATCTGCACTTTGAAACTCGTCCGCAGGATGTGCTGAAGG
CGTACTTCTTTGCAGTGTCCTATTTGCAGGACAGGAATCAGCTTAAGGAG
AAATACTGGGACATTCAGACGAAGTGGCAGGAGTTTTTGGCGCTGGCGCA
GCAAGAGGGTTGGCTAATCCATCATCACTTGCTGCTGGTGGACGAATACC
GTTTAGATTGGAAGGTGGCAAGCTTTCTAGACCAT
BO33382.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10338-RB | 1254 | CG10338-PB | 1..1251 | 17..1267 | 6240 | 99.9 | Plus |
| CG10338-RA | 1254 | CG10338-PA | 1..1251 | 17..1267 | 6240 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:09:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10338-RB | 2418 | CG10338-RB | 479..1729 | 17..1267 | 6240 | 99.9 | Plus |
| CG10338-RA | 2351 | CG10338-RA | 412..1662 | 17..1267 | 6240 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:09:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18696565..18697360 | 81..876 | 3965 | 99.9 | Plus |
| 2L | 23513712 | 2L | 18697419..18697756 | 873..1210 | 1690 | 100 | Plus |
| 2L | 23513712 | 2L | 18696142..18696208 | 17..83 | 335 | 100 | Plus |
| 2L | 23513712 | 2L | 18697823..18697882 | 1208..1267 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:09:26 has no hits.
BO33382.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-22 18:21:44 Download gff for
BO33382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10338-RA | 410..1660 | 17..1269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:28 Download gff for
BO33382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10338-RA | 412..1662 | 17..1269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:22:21 Download gff for
BO33382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10338-RA | 412..1662 | 17..1269 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:22:21 Download gff for
BO33382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18696142..18696208 | 17..83 | 100 | -> | Plus |
| 2L | 18696568..18697358 | 84..874 | 99 | -> | Plus |
| 2L | 18697421..18697754 | 875..1208 | 100 | -> | Plus |
| 2L | 18697824..18697882 | 1209..1269 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:28 Download gff for
BO33382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18696142..18696208 | 17..83 | 100 | -> | Plus |
| arm_2L | 18696568..18697358 | 84..874 | 99 | -> | Plus |
| arm_2L | 18697421..18697754 | 875..1208 | 100 | -> | Plus |
| arm_2L | 18697824..18697882 | 1209..1269 | 96 | | Plus |
BO33382.pep Sequence
Translation from 16 to 1285
> BO33382.pep
MKIHFREQYGRKGEEILYVTPADQSNIVRVPLRGDKLVIQEKFLLFRVLQ
KVFLPKGYPDSVSEDYAAYQIWDTAQAFCSTICGTLCTHAILKGIGVGSE
NINAFSATATWILKEGSGHVGRIVFAWWQGSQLDVDSKKWRLRADFLNDL
AMGIEIYVLPKYPHFSTQILCCSTLLKAIVGVAGGATRSALTQHHALRGN
LADVASKDSSQETCVNLVASFVGLYLLSLIKSQAVLYTIFYVVVSLHLYA
NLKAVRAVCLRSFNESRYLIALEEFFRSSRMLSPQQVNAMERVTVGQTVS
VSLNIKLGLSVKNLIDEYKSSSVIENIVSSFDPHEHFIIAQTKKCLGVYL
HFETRPQDVLKAYFFAVSYLQDRNQLKEKYWDIQTKWQEFLALAQQEGWL
IHHHLLLVDEYRLDWKVASFLDH
BO33382.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10338-PB | 417 | CG10338-PB | 1..417 | 1..417 | 2160 | 100 | Plus |
| CG10338-PA | 417 | CG10338-PA | 1..417 | 1..417 | 2160 | 100 | Plus |
