BO33390.complete Sequence
1090 bp assembled on 2012-08-22
GenBank Submission: KX799745
> BO33390.complete
GAAGTTATCAGTCGACATGTGGAAAATACATAACAAGCTCTTAATCTACA
TACTCTGGATTATGGAAATAAGATTAGTGTCCAGCTTTACATCCGTCATG
CTCTGTGGCCGGATTCCGGGCCTGACCCCGGGCCAGCGAAATATGTGCCG
CGAGATGCCCGACGCACTGATTGCCCTGGGCGAGGGCCACCAATTGGGCG
CCCAGGAGTGCCAGCACCAGTTCCGAGGACACCGCTGGAACTGCTCGGAG
GTGTGGCAGCGCAACGTCTTCGCCCATGTCATACCCACAGCTTCTCGTGA
GGCTGCCTACACCTATGCGATAGCAAGTGCCGGAGCGGCGTACGCGGTGA
CCGCCGCCTGTGCCCGCGGCAACATCTCCACCTGCGGCTGTGATGTGCGG
CACAAAGCCACGCCCACTGGCGGCGGTACGCCCGACGAGCCCTGGAAGTG
GGGCGGCTGCTCGGCGGACGTGGACTTTGGGATGCGGTATGCGCGCAGAT
TCATGGATGCCCGCGAATTGGAGCGCGACTCCCGCACGCTGATGAACCTG
CACAATAACCGAGCAGGGAGAACGCTGGTCAAGAAGATGCTGCGCACGGA
CTGCAAGTGCCATGGCGTCAGTGGCTCCTGCGTGATGAAGACCTGCTGGA
AGAGCCTGCCGCCCTTTCGACTGGTTGGCGATAGACTCATGCTGAAGTAT
CAAAAAGCCAAAACTGTTCAAGCCGTCAAAGGCAAACGTGGACTGAGATT
AGTATTAAGCAGAAAGAAGCATGCCGGCACCGCTCGTGCCCAGAAACCGG
TCCTCGATTGGCCGAAGCGCATGGAGCTGATCTACCTGGAGGCGTCGCCC
AACTACTGCGAGCGAAGTCTGCAGACGGGCAGCCAGGGCACCTCAGGTCG
GACCTGCCAGCGGACCGGCCACGGCCCCCAGAGCTGCGATCTGCTCTGCT
GTGGGCGTGGCCACAACACGCAGCACATTCGAAGGACCACGCAGTGCCGC
TGCCAATTCCGCTGGTGCTGCGAGGTCAAGTGTGACGAGTGCGACGAGAG
CTACGAGGAGTTCACCTGTAAAGCAAGCTTTCTAGACCAT
BO33390.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:22:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt2-RA | 1059 | CG1916-PA | 1..1056 | 17..1072 | 5280 | 100 | Plus |
| Wnt2-RB | 978 | CG1916-PB | 1..975 | 98..1072 | 4875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:22:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt2-RA | 2240 | CG1916-RA | 1028..2088 | 12..1072 | 5290 | 99.9 | Plus |
| Wnt2-RB | 2235 | CG1916-RB | 1028..2083 | 12..1072 | 5180 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:22:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9502723..9503036 | 759..1072 | 1570 | 100 | Plus |
| 2R | 25286936 | 2R | 9501970..9502256 | 288..574 | 1435 | 100 | Plus |
| 2R | 25286936 | 2R | 9501369..9501588 | 71..290 | 1100 | 100 | Plus |
| 2R | 25286936 | 2R | 9502321..9502509 | 574..762 | 945 | 100 | Plus |
| 2R | 25286936 | 2R | 9495193..9495253 | 12..72 | 290 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:22:36 has no hits.
BO33390.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-22 17:08:16 Download gff for
BO33390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt2-RA | 1030..2085 | 17..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:11 Download gff for
BO33390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt2-RA | 1033..2088 | 17..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:52 Download gff for
BO33390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt2-RA | 1033..2088 | 17..1074 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:52 Download gff for
BO33390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9495198..9495253 | 17..72 | 100 | -> | Plus |
| 2R | 9501371..9501588 | 73..290 | 100 | -> | Plus |
| 2R | 9501973..9502256 | 291..574 | 100 | -> | Plus |
| 2R | 9502322..9502509 | 575..762 | 100 | -> | Plus |
| 2R | 9502727..9503036 | 763..1074 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:11 Download gff for
BO33390.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5382703..5382758 | 17..72 | 100 | -> | Plus |
| arm_2R | 5388876..5389093 | 73..290 | 100 | -> | Plus |
| arm_2R | 5389478..5389761 | 291..574 | 100 | -> | Plus |
| arm_2R | 5389827..5390014 | 575..762 | 100 | -> | Plus |
| arm_2R | 5390232..5390541 | 763..1074 | 99 | | Plus |
BO33390.pep Sequence
Translation from 16 to 1090
> BO33390.pep
MWKIHNKLLIYILWIMEIRLVSSFTSVMLCGRIPGLTPGQRNMCREMPDA
LIALGEGHQLGAQECQHQFRGHRWNCSEVWQRNVFAHVIPTASREAAYTY
AIASAGAAYAVTAACARGNISTCGCDVRHKATPTGGGTPDEPWKWGGCSA
DVDFGMRYARRFMDARELERDSRTLMNLHNNRAGRTLVKKMLRTDCKCHG
VSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAVKGKRGLRLVLSRK
KHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRT
GHGPQSCDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFT
CKASFLDH
BO33390.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt2-PA | 352 | CG1916-PA | 1..352 | 1..352 | 1949 | 100 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 1..325 | 28..352 | 1809 | 100 | Plus |
| Wnt10-PB | 483 | CG4971-PB | 76..473 | 30..342 | 606 | 33.4 | Plus |
| Wnt6-PC | 420 | CG4969-PC | 218..419 | 139..351 | 488 | 39.5 | Plus |
| Wnt6-PB | 420 | CG4969-PB | 218..419 | 139..351 | 488 | 39.5 | Plus |
| Wnt6-PC | 420 | CG4969-PC | 63..141 | 57..139 | 163 | 41 | Plus |
