BO33391.complete Sequence
1252 bp assembled on 2012-08-30
GenBank Submission: KX794213
> BO33391.complete
GAAGTTATCAGTCGACATGACGACCAGCAGATCATCGGCGTCCGCGTCAT
TCAGTCGACCGGCTTTCTGGAAGGTGCCCGGTTACGAATTGCCCACGTCC
TATCGTCCACAGCCGACCCCAAAACCGCCGCTCGTACCGCTGCCATCGCC
CTGCAGGCGGCGCAGCAGCAGCGGACTGAAGAAGCGCGTCCATTTTGCCG
ATGAGCAAAACGTGGGGGTGCAAGTGGGCAGCCCAGCGCATGGCGAACTT
CTAAGAGGCGACATCATCTCGAAGATCGGCGAGTACGACGCACGCGACCT
GAGTCATGCGGATGCACAGCAGCTGTTCCGCGGCGCTGGCAACGAGATCC
GCCTGGTGGTGCACAGGGACAACAAAATCGCCTACACGCAGGGTGCAACT
CAGGAGGCAGGTCCTGGATCTCGGAGCAACTCCACTTTGCCGCCGGTCAC
TCCGGATCTGATGCCCCACCGCGGTCCGTCGCCCTTTTTGCCCGGACCCA
GCCACTTTGAGAGGGCCCTCCAGTTGCCGGTGGACACGTTGCCGCAGACC
GTGTTTCCCCAGCTGAACTCATCCGGTGGCTATGAGGTGCCATCGACTGT
GTTCTCACCCAAGCCAACCAGGGACCATCAACAAGACGTCGATGAGGAGC
AGGCGGCCATTGTGAATCAGCCCTACCGTACAACTCCGCTGGTCCTGCCC
GGCGCCAAAGTGAAGAAGGATGCGCCCACGACAGAGTCCTACTTGAGGCA
CTACCCCAACCCGGCTGTGCGCGCCCACCCAGGACACGACTACCATGACA
GTATCATGAAGCAGCGCGTGGCCGACACCATGCTGCACAAGGTGGTCGGT
TCGGAAGCCGACACTGGCCGCGTCTTCCACAAGCAATTCAACTCGCCCAT
TGGCCTGTACTCCAACAACAACATCGAGGACACCATCAGATCCACAGTTC
CCTATAAGAAAACTGTCCAGTACGATCCCAGGAACAGCGAAACCTACAGA
GCCATTCAAGAAGAGGGCGGCTACAGCAACTATGGCCAATCCTCGCCACA
GGAAGTGACCATTCCTGTGCAGACTAAGGTCTATCAGCCCAATAGATTGG
TTCCAGGAAAGAAACCAGTATCAGCGCCAGTATCCCGGCCGCCGTACAAT
GTGGTAAACACCCACGATGAGAACATACGCCAGAGCGGCTCCTTCAATCG
TCTCATGTACAGCGTGATTGGTGCCACCGAGTACGCAAGCTTTCTAGACC
AT
BO33391.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp66-RN | 1221 | CG6416-PN | 1..1218 | 17..1234 | 6090 | 100 | Plus |
| Zasp66-RK | 1137 | CG6416-PK | 116..1134 | 216..1234 | 5095 | 100 | Plus |
| Zasp66-RE | 1293 | CG6416-PE | 1..937 | 17..953 | 4685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp66-RN | 1793 | CG6416-RN | 113..1330 | 17..1234 | 6090 | 100 | Plus |
| Zasp66-RK | 1642 | CG6416-RK | 301..1319 | 216..1234 | 5095 | 100 | Plus |
| Zasp66-RE | 1725 | CG6416-RE | 113..1049 | 17..953 | 4685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8627424..8627730 | 364..670 | 1535 | 100 | Plus |
| 3L | 28110227 | 3L | 8634580..8634785 | 668..873 | 1030 | 100 | Plus |
| 3L | 28110227 | 3L | 8624483..8624685 | 17..219 | 1015 | 100 | Plus |
| 3L | 28110227 | 3L | 8637439..8637598 | 952..1111 | 800 | 100 | Plus |
| 3L | 28110227 | 3L | 8626960..8627110 | 217..367 | 755 | 100 | Plus |
| 3L | 28110227 | 3L | 8638267..8638350 | 1151..1234 | 420 | 100 | Plus |
| 3L | 28110227 | 3L | 8635002..8635081 | 872..951 | 400 | 100 | Plus |
| 3L | 28110227 | 3L | 8638155..8638198 | 1110..1153 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:53:30 has no hits.
BO33391.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-30 11:59:14 Download gff for
BO33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp66-RN | 111..1328 | 17..1236 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:43 Download gff for
BO33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp66-RN | 113..1330 | 17..1236 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:12 Download gff for
BO33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp66-RN | 113..1330 | 17..1236 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:12 Download gff for
BO33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8624483..8624683 | 17..217 | 100 | -> | Plus |
| 3L | 8626961..8627109 | 218..366 | 100 | -> | Plus |
| 3L | 8627427..8627730 | 367..670 | 100 | -> | Plus |
| 3L | 8634583..8634783 | 671..871 | 100 | -> | Plus |
| 3L | 8635002..8635081 | 872..951 | 100 | -> | Plus |
| 3L | 8637439..8637598 | 952..1111 | 100 | -> | Plus |
| 3L | 8638157..8638195 | 1112..1150 | 100 | -> | Plus |
| 3L | 8638267..8638350 | 1151..1236 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:43 Download gff for
BO33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8617583..8617783 | 17..217 | 100 | -> | Plus |
| arm_3L | 8620061..8620209 | 218..366 | 100 | -> | Plus |
| arm_3L | 8620527..8620830 | 367..670 | 100 | -> | Plus |
| arm_3L | 8627683..8627883 | 671..871 | 100 | -> | Plus |
| arm_3L | 8628102..8628181 | 872..951 | 100 | -> | Plus |
| arm_3L | 8630539..8630698 | 952..1111 | 100 | -> | Plus |
| arm_3L | 8631257..8631295 | 1112..1150 | 100 | -> | Plus |
| arm_3L | 8631367..8631450 | 1151..1236 | 97 | | Plus |
BO33391.pep Sequence
Translation from 16 to 1252
> BO33391.pep
MTTSRSSASASFSRPAFWKVPGYELPTSYRPQPTPKPPLVPLPSPCRRRS
SSGLKKRVHFADEQNVGVQVGSPAHGELLRGDIISKIGEYDARDLSHADA
QQLFRGAGNEIRLVVHRDNKIAYTQGATQEAGPGSRSNSTLPPVTPDLMP
HRGPSPFLPGPSHFERALQLPVDTLPQTVFPQLNSSGGYEVPSTVFSPKP
TRDHQQDVDEEQAAIVNQPYRTTPLVLPGAKVKKDAPTTESYLRHYPNPA
VRAHPGHDYHDSIMKQRVADTMLHKVVGSEADTGRVFHKQFNSPIGLYSN
NNIEDTIRSTVPYKKTVQYDPRNSETYRAIQEEGGYSNYGQSSPQEVTIP
VQTKVYQPNRLVPGKKPVSAPVSRPPYNVVNTHDENIRQSGSFNRLMYSV
IGATEYASFLDH
BO33391.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp66-PN | 406 | CG6416-PN | 1..406 | 1..406 | 2153 | 100 | Plus |
| Zasp66-PE | 430 | CG6416-PE | 1..430 | 1..406 | 2118 | 94.4 | Plus |
| Zasp66-PK | 378 | CG6416-PK | 40..378 | 68..406 | 1794 | 100 | Plus |
| Zasp66-PF | 402 | CG6416-PF | 40..402 | 68..406 | 1759 | 93.4 | Plus |
| Zasp66-PO | 326 | CG6416-PO | 1..324 | 1..324 | 1664 | 97.2 | Plus |
