BO33395.complete Sequence
2722 bp assembled on 2012-10-01
GenBank Submission: KX797612
> BO33395.complete
GAAGTTATCAGTCGACATGGCCAAGTTGAAGAAACTGCATATGAGCTCCA
ACCTTGATGACCTGGAGAAGATGTCCATCATTCCGGATCTGCGCAGCAAG
GGCATGAAAATCCTACTGAACACCGCCCGCAAACTGTACATGACCGCCGA
GGAGTACAGACTGGATGGCGACGAGGAACTGGCCTACATCACCTACATGA
AGTACTTCAATATGCTGACCGCAATTCACAAAAAATCCGATTACCCCAGC
CACAAGACGACGGTGCGCCAGATGCTGGGCGACACCGAGTCGAATCGCCG
CATTATGGACACGCTGGAGGAGATTATCAACTCTCTGCGGCATCGTTATG
CTCAGCAGCACCAAGCGCCGGAACCAATTGCTCCCGACCTGGTTAGCAAT
GGGCGTGCGGGTGTGGACTCGCCGATAACACAGCCAACGCAGTACGCCCG
ACTTGGGCTGATAACCTGTCAGGATCTGTATCGGCGCATGCAGGAGAAAT
CGGTCCTAGTTATGGACTGTCGCCCAAGCGCCGACTACGAGGCCTCCCAC
CTCACGTACTACTGTGCATTTAATGTGCCCGAGGAGTTGATAACGCCAGG
AATGTCGGCTGGCAGATTGCAGGCTCGTCTTAGCAGCAGCGCCAAGGCGT
CGTGGGCATCGCGTTCCGTCAAGGATTCGGTGGTTCTTATGGACTGGAAC
ACCAAAGATGCCCAACCGGCGACCAACACAGCCATTTCAACCCTTCTGGA
CATCCTGAAGAACTGGGATCCGGATGTGACGTATCGCGCACCCATTCAAA
TTGTCGAGGGCGGTTATGAGTACTTCATTATGATGTACCCGACCCATTGC
ACTAATCCCAGTGTGCAGGCGCCGCAGCAGAACAACAACGACATTGAGAC
CATCGATGATATCGAGTATCCCTCAATCCACGACATCACCATGAAGGAGG
ATATTAGTGCGAAGGACTTCAGACCGCGTCCAGACTTCAATCGGGCCAAC
AAGCCAGCGGCCACTCGCGTTAATGAACAGGGAATTTCCCGTCCTTCTCC
GCCGGCTAAGCCCATTGCTGAGATCATGCGTGATCAGGCCGAGTTTTTGC
AGCGCGCAGAGCAGAACGATGAGCAGTTGGAGAAGGCCTCAAAAATGTGG
AAGCGTCAAGCAGCAGAGGGCGATGGTTTGAATGCTACCGAGGACCAGGA
GTTGCACTTCAGGATCCTACAGTTGGAGAGCAAGGCCCAGGACTATATCG
TGGAAAACAATCGTCTGCGAGAAGAACTAAGTCGCATACAAGAGCTACAC
AATGTTACGCAGCAGTTGTCGCAAAAGGAGGTCGAGGCAACGAGGAATAT
AGAATCCAAGATCCGCGAACGACAGCGCTTGGACGAGCAGCATGAACTTG
AACGTCAAGAGCGGGAGCGCCTTTTGGCGATCGCTCGCGAGACAAAAAAG
CATTACAAGTCACCAACACCTTCGGGCCCGCCTTCGCCGGGCAGGAACTT
GGAGGACGTACATGTCGTGTCAGACAGCCTGGAATCCCTGCTCCAGTTGA
CTGGCGATCCGGATCCGACAATTGCGCCAAACAAGGCGGAAATACCAACA
TTCGATCGGGCGATGAAACCGCAGCCGAGGAATGTGGAGAGGACATCGCA
ACGCGTTCGTGATTTCTCGCCTGTCATTGGTCAGAATGTGGGTCGTGGAC
TGACTGGACTGAAGAATCTGGGCAACACCTGCTATATGAACAGCATACTG
CAGTGCCTGAGCAACACGCCTCAGTTGACCGAGTACTGCATTTCGGACAA
ATACAAGAATTACATCAGCAGAAGCAACAAGACTAATGGCCAGGTGATCG
AAGAGGTGGCTGCACTCATCAAGGAGCTCTGGAATGGACAGTACAAGTGT
GTGGCCAGCCGAGATTTGAGGTACGTTGTGGGCCAGTACCAGAAGATCTT
CCGCGGCGTTGACCAGCAGGACTCACACGAATTCCTCACCATCCTGATGG
ACTGGCTGCACTCGGATCTCCAGACCCTACATGTGCCCCGTCAGCGGGAG
ATGATCAGTGCGTCGGAAAAGGCTTGGCTGGAATTTACCAAGGCGAAGGA
GAGCATGATTCTGCATTTATTCTATGGCCAAATGAAGAGCACTGTGAAAT
GTGTGGCCTGCCACAAGGAGTCCGCCACGTACGAGAGTTTTTCTAATCTC
AGCCTGGAGCTGCCGCCAAACTCGAATGTATGTCAGCTGAACCAGTGCAT
GGACATGTACTTCAGTGGAGAAAGGATCCATGGCTGGAATTGTCCTAGTT
GTAAAACGAAAAGAGATGCCATCAAGAAGCTGGATATATCGAAGCTGCCA
CCTGTGCTGGTGGTGCATCTTAAGCGCTTCTATGCGGATCCCAGTAACTC
TGGCTCGTACATGAAGAAGCAGAACTACTTGCGCTTCCCGCTCGAGAACT
TGGACATGAATCCCTACATAGCTCGGGCGGAATCGCGGGCGGTAACACCT
AAGACCTACCAGCTGTACGCCGTATCCAATCACTACGGCACCATGGAAGG
CGGGCACTACACGGCATTTTGCAAGAGCGCCAACTACGGAAAATGGTTCA
AGTTCGACGATCAGGTCGTCTCGGCGTTGGACTCCTCTAACGTGGTTTCT
AGCGCTGCATACATTCTTTTCTACACCTGGCTGCCACCCATGCAGGTGCC
TCTGGCAAGCTTTCTAGACCAT
BO33395.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:30:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ubpy-RA | 2691 | CG5798-PA | 1..2688 | 17..2704 | 13425 | 100 | Plus |
| Ubpy-RB | 1104 | CG5798-PB | 88..1101 | 1691..2704 | 5055 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:30:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ubpy-RA | 3204 | CG5798-RA | 150..2837 | 17..2704 | 13425 | 100 | Plus |
| Ubpy-RB | 1546 | CG5798-RB | 166..1179 | 1691..2704 | 5055 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:30:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21134569..21135057 | 112..600 | 2445 | 100 | Plus |
| 3R | 32079331 | 3R | 21135335..21135817 | 764..1246 | 2415 | 100 | Plus |
| 3R | 32079331 | 3R | 21137008..21137463 | 1921..2376 | 2280 | 100 | Plus |
| 3R | 32079331 | 3R | 21135873..21136317 | 1247..1691 | 2225 | 100 | Plus |
| 3R | 32079331 | 3R | 21137519..21137847 | 2376..2704 | 1630 | 99.7 | Plus |
| 3R | 32079331 | 3R | 21136714..21136945 | 1690..1921 | 1160 | 100 | Plus |
| 3R | 32079331 | 3R | 21135116..21135279 | 600..763 | 820 | 100 | Plus |
| 3R | 32079331 | 3R | 21134411..21134505 | 17..111 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:30:32 has no hits.
BO33395.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-01 14:51:19 Download gff for
BO33395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubpy-RA | 150..2837 | 17..2706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:54:43 Download gff for
BO33395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubpy-RA | 150..2837 | 17..2706 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:05:41 Download gff for
BO33395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubpy-RA | 150..2837 | 17..2706 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:05:41 Download gff for
BO33395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21134411..21134505 | 17..111 | 100 | -> | Plus |
| 3R | 21134569..21135057 | 112..600 | 100 | -> | Plus |
| 3R | 21135117..21135279 | 601..763 | 100 | -> | Plus |
| 3R | 21135335..21135817 | 764..1246 | 100 | -> | Plus |
| 3R | 21135873..21136316 | 1247..1690 | 100 | -> | Plus |
| 3R | 21136715..21136945 | 1691..1921 | 100 | -> | Plus |
| 3R | 21137009..21137463 | 1922..2376 | 100 | -> | Plus |
| 3R | 21137520..21137847 | 2377..2706 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:54:43 Download gff for
BO33395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16960133..16960227 | 17..111 | 100 | -> | Plus |
| arm_3R | 16960291..16960779 | 112..600 | 100 | -> | Plus |
| arm_3R | 16960839..16961001 | 601..763 | 100 | -> | Plus |
| arm_3R | 16961057..16961539 | 764..1246 | 100 | -> | Plus |
| arm_3R | 16961595..16962038 | 1247..1690 | 100 | -> | Plus |
| arm_3R | 16962437..16962667 | 1691..1921 | 100 | -> | Plus |
| arm_3R | 16962731..16963185 | 1922..2376 | 100 | -> | Plus |
| arm_3R | 16963242..16963569 | 2377..2706 | 99 | | Plus |
BO33395.pep Sequence
Translation from 16 to 2722
> BO33395.pep
MAKLKKLHMSSNLDDLEKMSIIPDLRSKGMKILLNTARKLYMTAEEYRLD
GDEELAYITYMKYFNMLTAIHKKSDYPSHKTTVRQMLGDTESNRRIMDTL
EEIINSLRHRYAQQHQAPEPIAPDLVSNGRAGVDSPITQPTQYARLGLIT
CQDLYRRMQEKSVLVMDCRPSADYEASHLTYYCAFNVPEELITPGMSAGR
LQARLSSSAKASWASRSVKDSVVLMDWNTKDAQPATNTAISTLLDILKNW
DPDVTYRAPIQIVEGGYEYFIMMYPTHCTNPSVQAPQQNNNDIETIDDIE
YPSIHDITMKEDISAKDFRPRPDFNRANKPAATRVNEQGISRPSPPAKPI
AEIMRDQAEFLQRAEQNDEQLEKASKMWKRQAAEGDGLNATEDQELHFRI
LQLESKAQDYIVENNRLREELSRIQELHNVTQQLSQKEVEATRNIESKIR
ERQRLDEQHELERQERERLLAIARETKKHYKSPTPSGPPSPGRNLEDVHV
VSDSLESLLQLTGDPDPTIAPNKAEIPTFDRAMKPQPRNVERTSQRVRDF
SPVIGQNVGRGLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYI
SRSNKTNGQVIEEVAALIKELWNGQYKCVASRDLRYVVGQYQKIFRGVDQ
QDSHEFLTILMDWLHSDLQTLHVPRQREMISASEKAWLEFTKAKESMILH
LFYGQMKSTVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS
GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMK
KQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYGTMEGGHYTA
FCKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFYTWLPPMQVPLASFL
DH
BO33395.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:54:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ubpy-PA | 896 | CG5798-PA | 1..896 | 1..896 | 4696 | 100 | Plus |
| Ubpy-PB | 367 | CG5798-PB | 21..367 | 550..896 | 1814 | 97.7 | Plus |
| CG14619-PH | 565 | CG14619-PH | 238..562 | 561..886 | 572 | 37.3 | Plus |
| CG14619-PA | 856 | CG14619-PA | 529..853 | 561..886 | 572 | 37.3 | Plus |
| CG14619-PB | 337 | CG14619-PB | 11..334 | 562..886 | 566 | 37.1 | Plus |
