BO33424.complete Sequence
613 bp assembled on 2012-10-29
GenBank Submission: KX797480
> BO33424.complete
GAAGTTATCAGTCGACATGAAGGTTTTCGTCTGCTTGCTGGCGGTGTGCA
GTATGGCCCATGCGGGTTTCCTGGGCGGCGGCGGCGCAGGAGGTAGTGCC
CTCAGCTCCGGCTGGTCATCCGGCGGAGGAGGAGGAGGATATAGCGGCGG
ATACAGTGGTGGCCATGGAGGAGGTGGTGGCTACGGCGGTGGTGGCTACG
GCGGTGGTGGCTACGGCGGCGGTGGCCACGGAGGCGGCAGCACGATTAAG
ATCATCAAGGTGATCACCGATTCCGGAGCTGGTGGTGGTGGCTACGGAGG
TGGCTACGGGGGTGGCCATGGAGGTGGCTATGGAGGTGGCTACGGAGGCG
GCTCCTCCGGTGGTTACAGTGGCGGCCACGGAGGCGGTTGGTCATCCGGC
GGTGGATACGGCGGTGGTGGCTACGGAAGCGGTGGCAACGTCAAGATCAT
CAAGGTCATCTCCGACGCCGGATCGAGCGGCGGGTATGGCGGCGGCTACG
GCGGTGGTCACGGTGGTGGATACTCCTCCGGCGGTGCCTCCAGCTACTCC
GCCGGCGGTTGGGCTCCTCAGGGCGGTTGGGCCCAGAGCAGTTGGGCAAG
CTTTCTAGACCAT
BO33424.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:57:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14191-RA | 582 | CG14191-PA | 1..579 | 17..595 | 2895 | 100 | Plus |
| CG15597-RB | 450 | CG15597-PB | 120..275 | 187..348 | 290 | 81.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:57:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14191-RA | 787 | CG14191-RA | 78..658 | 15..595 | 2905 | 100 | Plus |
| CG15597-RB | 679 | CG15597-RB | 160..315 | 187..348 | 290 | 81.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:57:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19081863..19082437 | 21..595 | 2875 | 100 | Plus |
| 3R | 32079331 | 3R | 6284826..6284981 | 348..187 | 290 | 81.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:57:42 has no hits.
BO33424.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-29 14:00:00 Download gff for
BO33424.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14191-RA | 78..656 | 17..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:57:55 Download gff for
BO33424.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14191-RA | 78..656 | 17..597 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:18:00 Download gff for
BO33424.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14191-RA | 80..658 | 17..597 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:18:00 Download gff for
BO33424.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19081859..19082437 | 17..597 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:57:55 Download gff for
BO33424.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18975892..18976470 | 17..597 | 99 | | Plus |
BO33424.pep Sequence
Translation from 16 to 613
> BO33424.pep
MKVFVCLLAVCSMAHAGFLGGGGAGGSALSSGWSSGGGGGGYSGGYSGGH
GGGGGYGGGGYGGGGYGGGGHGGGSTIKIIKVITDSGAGGGGYGGGYGGG
HGGGYGGGYGGGSSGGYSGGHGGGWSSGGGYGGGGYGSGGNVKIIKVISD
AGSSGGYGGGYGGGHGGGYSSGGASSYSAGGWAPQGGWAQSSWASFLDH
BO33424.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14191-PA | 193 | CG14191-PA | 1..193 | 1..193 | 1099 | 100 | Plus |
| CG12523-PB | 250 | CG12523-PB | 1..250 | 1..193 | 434 | 44.7 | Plus |
| CG12523-PA | 250 | CG12523-PA | 1..250 | 1..193 | 434 | 44.7 | Plus |
| CG15597-PB | 149 | CG15597-PB | 1..141 | 1..167 | 412 | 54.1 | Plus |
| CG13376-PC | 193 | CG13376-PC | 23..193 | 22..189 | 405 | 50.8 | Plus |
| CG15597-PB | 149 | CG15597-PB | 27..97 | 108..180 | 257 | 61.6 | Plus |
