BO33455.complete Sequence
4099 bp assembled on 2012-09-21
GenBank Submission: KX799011
> BO33455.complete
GAAGTTATCAGTCGACATGCAGTCGCTGAAAACGGCAGATTTGCCGGAAA
ATCCCCGGGAACATTGCAATTTTATTTCGGCAGCATGTTTTTGGTACACC
ATGCCGACTTTTATCAAGGGTCGGAAACGCACATTGGATACCAAGGATCT
TTACAGAGCCTTAAAAGAGCACAAATCTGAGACTCTGGGGAACAAATTGT
GCGCTTCCTGGGAATTGGAACTTGAGAAGACCAAAGGAAAGCCCAATTTG
TTGAGAGCCCTTCTGCGAGTTTTTGGCTGGTACTTCGCACTGCTTGGCCT
GGTGCTTTTCCTGCTGGAATTGGGTCTTCGAACGCTTCAGCCAATCTTCC
TGCTGAAACTCATCGCCTACTACACACATGGCTCGGAATCGATTGAATCG
GCCTATTACTATGCAGCTGGAGTGATCCTGTGCAGTGCCCTCAATGTCAT
TATAATGCATCCCTATATGCTAGGCACAATGCATGTGGGACTCAAGATGC
GCGTTGGTATGTGCAGCATGATCTACCGCAAGGCGTTACGGCTGAGTAAG
TCGGCGTTGGGAGACACCACAGCTGGACATGTGGTGAATCTTATGTCCAA
CGACGTGGGACGTCTCGATCTGGCTACCATATTCGTACACTACTTGTGGG
TGGGACCGCTGGAGACCCTCTTTATCACATACCTAATGTACCGTGAGATT
GGAATCGCTGCTGTGTTTGGTGTGGCCTTCATGTTGCTGTTCATCCCCCT
GCAGGCGTATCTGGGAAAAAGAACATCGGTGTTGCGACTCAGAACCGCCT
TACGCACGGATGAAAGGGTACGGATGATGAACGAAATCATCTCGGGCATT
CAGGTGATTAAAATGTACGCATGGGAATTGCCATTCGAACATATGGTGGC
CTTTGCCCGTAAGAAGGAGATAAATGCCATCCGCCATGTGTCCTACATCC
GTGGAATTCTGCTCTCCTTCATCATCTTTCTGACGCGTGTCTCAATTTTC
CTGAGTCTGGTGGGATATGTTCTGCTCGGGACGTTCCTAACCCCGGAAGT
GGCGTTCTTGATCACAGCCTACTACAATATCCTGCGTACCACTATGACGG
TGTTCTTTCCCCAGGGCATTTCCCAAATGGCGGAGACCCTGGTGTCCATT
AAGCGTGTCCAGAAGTATATGCAGTCCGACGAGACGAATGTGATGGATAT
GAGTGTGGATCTTACCGAGGATTTCCAAGGAAGCAATCAGGAAACGGTTC
ATGCCGATGGAGATGAGGAGCGCGACGAAGCTGAGGATAAGCTTTTAGGT
CCACCAATTGCCACTGTTAATGAGAACGCCAAGTTGTCGGAGGCGGGAAT
CTCTATTAGCGGACTTATGGCCAAATGGGATGTTAACTCCCCCGATTACT
CGCTTAATGGTGTAAATCTTCGTGTTCAGCCTGGAACCATGCTGGGTATT
GTCGGACGCACTGGATCCGGTAAATCCAGTCTCATCCAAGCCATCCTTGG
TGAACTGCCCGCAGAGTCTGGCGAGATAAAGGTTAATGGCTCCATGTCGT
ATGCTTCCCAAGAACCGTGGCTCTTTTCCGGCACTGTGCGACAAAATATT
CTCTTTGGCCAGCCTATGGATCGTCGTCGTTACGCTAAGGTGGTGAAGAA
ATGTGCCCTGGAGCGAGATTTCGAGCTGCTCCCGTTTAAGGATAAAACCA
TAGTTGGAGAGCGTGGAGCTTCCCTGTCGGGTGGCCAAAAGGCGAGAATC
AGTTTGGCAAGAGCTGTTTATCGGGAGACCTCCATATACCTGCTGGATGA
TCCTCTGAGTGCCGTGGACACCCATGTGGCCCGCCATCTGTTCGAGCAGT
GCATGCGTGGCTATCTACGCGAGCGAATTGTTATATTGGCCACTCATCAG
CTCCAGTTTTTGCAGCACGCCGATCAGATTGTCATCATGGATAAGGGTCG
TGTAAGCGCCGTGGGCACCTACGAGTCTCTACGCGAATCCGGGTTGGACT
TCGCCTCCATGCTAGCCGATCCAGAGCGGGATGAGCAATCAGAGGAGCGA
TCACGGTCGCGATCGGGCAGCTACACCCACAGTCATTCGGACCAGCGACG
CAACAGCGAGCAATCCCTACTTTCCATGGCAGATTCGTGCATGGATGACC
TCGAAGCGGAGCAAGCTAACAACCAGGAACGCCAGGAGGCTGGTCAAATC
GGCCTGCGCTTGTACAGCAAATACTTCAAAGCGGGAGGCGGTTTCTTCGC
CTTCTTCGTGATGATGGGCTTCTGTGTGCTCTCGCAAGGATTGGCCTCTC
TGGGTGACTATTTTCTCTCATATTGGGTTACCAAAAAGGGAAATGTGGCT
TACCGTGCAGATAATAATGACACAACTCGCTCTGAGGAACTCGAACCTCG
TCTGTCGACATGGCTTCGTGATATAGGATTGTCCGTGGATGCTGAAATGC
TGGATACTTATATATTCACGGTGATCACAGTACTGACCATCCTGGTGACC
GTGGCTCGCTCGTTTTTATTCTTTAATTTGGCCATGAAAGCCTCAATTCG
TTTGCACAATTCCATGTTCCGCGGCATCACCCGAGCTGCCATGTACTTCT
TCAATACGAATCCATCTGGGCGCATTCTAAACCGTTTCTCAAAGGATATG
GGACAAGTTGACGAGATACTGCCTGCCGTGATGATGGATGTCATCCAGAT
TTTCCTTGCACTTGCTGGCATTGTGATCGTCATAGCCGTTGTCAATCCGC
TGTTCCTTATTCCAACCGTAGTACTGGGGATTATTTTCTATCAACTGCGC
ACCTTTTATCTAAAGACATCAAGGGATGTAAAGCGCATGGAAGCAATTAC
TCGGTCTCCAGTATACTCGCATTTAGCTGCCTCGTTGACCGGTCTGTCCA
CCATTCGTGCCTTTGGAGCCCAACGTGTTCTGGAGGCGGAGTTCGACAAT
TACCAGGATATGCATAGCTCCGCATTTTATATGTTCATTAGCACCTCGCG
AGCCTTCGGATATTGGCTTGACTGTTTCTGTGTGATTTACATAGCCATAA
TTACTCTCAGTTTCTTCATCTTTCCTCCTGCGAACGGAGGCGATGTGGGA
CTGGCCATTACGCAGGCAATGGGAATGACCGGCATGGTTCAGTGGGGAAT
GCGTCAGTCAGCCGAGCTGGAGAATACGATGACAGCTGTGGAGCGAGTGG
TTGAGTACGAGGACATTGAACCGGAAGGAGCGTTGGAGGCTCCGGCCGAT
AAGAAGCCACCAAAGTCATGGCCAGAGCAGGGAAAAATCGTTTTCGACGA
GCTTAGCTTGCGCTATACGCCGGATCCAAAGTCGGAGAATGTGCTCAAGT
CACTTAGTTTCGTAATAAAACCTAAGGAGAAAGTAGGCATCGTGGGACGC
ACTGGAGCGGGAAAGTCTTCGCTGATTAATGCCCTGTTCCGACTGTCCTA
CAACGATGGATCTGTGCTCATAGACAAGAGGGATACCAGTGAGATGGGTT
TGCATGACCTGCGCAGCAAAATCTCGATCATACCGCAGGAACCCGTTCTG
TTTTCCGGCACTATGCGATACAACTTGGATCCCTTCGACGAGTATAGCGA
TGATAAGCTGTGGCGCTCCCTGGAGGAGGTAAAGCTAAAGGAGGTGGTTG
CTGATCTTCCCAGTGGCTTGCAGAGCAAAATCACCGAGGGCGGAACCAAC
TTCAGCGTTGGCCAGCGCCAGTTGGTCTGCTTGGCACGGGCTATACTGCG
TGAAAATCGTATCCTGGTAATGGACGAGGCTACGGCCAATGTGGATCCCC
AGACAGATGGCCTCATCCAAACCACCATACGAAACAAGTTCAAGGAGTGC
ACTGTGCTGACGATAGCTCATCGTTTGCACACCATCATGGACTCGGACAA
AGTCTTGGTGATGGACGCTGGTCGAGCGGTGGAGTTTGGAACGCCCTATG
AACTGCTGACGCTGGCGGATTCTAAGGTGTTCCACGGTATGGTGAAGCAA
ACGGGTCACGCCACCTATGAGAGTCTGCTGAAAATCGCCCAAAAGGCATT
CGAAAACAGGCAGAATCACAGTCTTTCCTCGGCAAGCTTTCTAGACCAT
BO33455.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:06:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7627-RB | 4068 | CG7627-PB | 1..4065 | 17..4081 | 20295 | 100 | Plus |
| CG7627-RA | 4068 | CG7627-PA | 1..4065 | 17..4081 | 20295 | 100 | Plus |
| l(2)03659-RC | 4125 | CG8799-PC | 2684..4116 | 2622..4054 | 2455 | 78.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:06:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7627-RB | 4778 | CG7627-RB | 451..4517 | 15..4081 | 20305 | 100 | Plus |
| CG7627-RA | 4525 | CG7627-RA | 206..4272 | 15..4081 | 20305 | 100 | Plus |
| l(2)03659-RC | 4411 | CG8799-RC | 2889..4321 | 2622..4054 | 2455 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:06:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8357942..8359572 | 2326..696 | 8140 | 99.9 | Minus |
| 2L | 23513712 | 2L | 8356044..8356977 | 4046..3113 | 4655 | 99.9 | Minus |
| 2L | 23513712 | 2L | 8357358..8357882 | 2849..2325 | 2625 | 100 | Minus |
| 2R | 25286936 | 2R | 9394186..9395119 | 3113..4046 | 1955 | 80.6 | Plus |
| 2L | 23513712 | 2L | 19001420..19002257 | 3114..3951 | 1580 | 79.2 | Plus |
| 2L | 23513712 | 2L | 8360209..8360519 | 489..179 | 1555 | 100 | Minus |
| 2L | 23513712 | 2L | 8357033..8357299 | 3116..2850 | 1335 | 100 | Minus |
| 2L | 23513712 | 2L | 19007033..19007965 | 3101..4033 | 1140 | 74.8 | Plus |
| 2L | 23513712 | 2L | 18999575..19000191 | 1385..2001 | 1090 | 78.4 | Plus |
| 3R | 32079331 | 3R | 19867574..19868234 | 4046..3386 | 1055 | 77.3 | Minus |
| 2L | 23513712 | 2L | 8359636..8359845 | 697..488 | 1050 | 100 | Minus |
| 2R | 25286936 | 2R | 9392431..9392850 | 1452..1871 | 705 | 77.9 | Plus |
| 3R | 32079331 | 3R | 11574912..11575480 | 3386..3954 | 670 | 74.5 | Plus |
| 3R | 32079331 | 3R | 19868320..19868678 | 3300..2942 | 505 | 76 | Minus |
| 2L | 23513712 | 2L | 20929791..20930029 | 3922..3684 | 475 | 79.9 | Minus |
| 3R | 32079331 | 3R | 19869749..19870179 | 1977..1547 | 475 | 74 | Minus |
| 2L | 23513712 | 2L | 8360947..8361033 | 179..93 | 435 | 100 | Minus |
| 2L | 23513712 | 2L | 8361099..8361179 | 95..15 | 405 | 100 | Minus |
| 2L | 23513712 | 2L | 18998919..18999388 | 696..1165 | 385 | 72.1 | Plus |
| 3R | 32079331 | 3R | 11574621..11574754 | 3095..3228 | 370 | 85.1 | Plus |
| 2L | 23513712 | 2L | 19001094..19001360 | 2850..3116 | 360 | 75.7 | Plus |
| 2L | 23513712 | 2L | 20931882..20932033 | 1866..1715 | 355 | 82.2 | Minus |
| 2R | 25286936 | 2R | 9393864..9394129 | 2851..3116 | 340 | 75.2 | Plus |
| 2L | 23513712 | 2L | 20930176..20930385 | 3595..3386 | 330 | 77.1 | Minus |
| 3R | 32079331 | 3R | 19868994..19869151 | 2710..2553 | 280 | 78.5 | Minus |
| 3R | 32079331 | 3R | 11574079..11574217 | 2553..2691 | 245 | 78.4 | Plus |
| 3R | 32079331 | 3R | 29163860..29163952 | 3500..3592 | 210 | 81.7 | Plus |
| 2R | 25286936 | 2R | 9391482..9391592 | 494..604 | 195 | 78.4 | Plus |
| 2L | 23513712 | 2L | 8355939..8355976 | 4081..4044 | 190 | 100 | Minus |
| 2L | 23513712 | 2L | 19004829..19004887 | 818..876 | 190 | 88.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:06:16 has no hits.
BO33455.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-21 17:40:18 Download gff for
BO33455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7627-RA | 22..4086 | 17..4083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:00 Download gff for
BO33455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7627-RA | 208..4272 | 17..4083 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:57:11 Download gff for
BO33455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7627-RA | 208..4272 | 17..4083 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:57:11 Download gff for
BO33455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8355936..8355974 | 4046..4083 | 94 | <- | Minus |
| 2L | 8356045..8356974 | 3116..4045 | 99 | <- | Minus |
| 2L | 8357034..8357299 | 2850..3115 | 100 | <- | Minus |
| 2L | 8357358..8357881 | 2326..2849 | 100 | <- | Minus |
| 2L | 8357943..8359570 | 698..2325 | 99 | <- | Minus |
| 2L | 8359636..8359844 | 489..697 | 100 | <- | Minus |
| 2L | 8360210..8360518 | 180..488 | 100 | <- | Minus |
| 2L | 8360947..8361032 | 94..179 | 100 | <- | Minus |
| 2L | 8361101..8361177 | 17..93 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:00 Download gff for
BO33455.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8355936..8355974 | 4046..4083 | 94 | <- | Minus |
| arm_2L | 8356045..8356974 | 3116..4045 | 99 | <- | Minus |
| arm_2L | 8357034..8357299 | 2850..3115 | 100 | <- | Minus |
| arm_2L | 8357358..8357881 | 2326..2849 | 100 | <- | Minus |
| arm_2L | 8357943..8359570 | 698..2325 | 99 | <- | Minus |
| arm_2L | 8359636..8359844 | 489..697 | 100 | <- | Minus |
| arm_2L | 8360210..8360518 | 180..488 | 100 | <- | Minus |
| arm_2L | 8360947..8361032 | 94..179 | 100 | <- | Minus |
| arm_2L | 8361101..8361177 | 17..93 | 100 | | Minus |
BO33455.pep Sequence
Translation from 16 to 4099
> BO33455.pep
MQSLKTADLPENPREHCNFISAACFWYTMPTFIKGRKRTLDTKDLYRALK
EHKSETLGNKLCASWELELEKTKGKPNLLRALLRVFGWYFALLGLVLFLL
ELGLRTLQPIFLLKLIAYYTHGSESIESAYYYAAGVILCSALNVIIMHPY
MLGTMHVGLKMRVGMCSMIYRKALRLSKSALGDTTAGHVVNLMSNDVGRL
DLATIFVHYLWVGPLETLFITYLMYREIGIAAVFGVAFMLLFIPLQAYLG
KRTSVLRLRTALRTDERVRMMNEIISGIQVIKMYAWELPFEHMVAFARKK
EINAIRHVSYIRGILLSFIIFLTRVSIFLSLVGYVLLGTFLTPEVAFLIT
AYYNILRTTMTVFFPQGISQMAETLVSIKRVQKYMQSDETNVMDMSVDLT
EDFQGSNQETVHADGDEERDEAEDKLLGPPIATVNENAKLSEAGISISGL
MAKWDVNSPDYSLNGVNLRVQPGTMLGIVGRTGSGKSSLIQAILGELPAE
SGEIKVNGSMSYASQEPWLFSGTVRQNILFGQPMDRRRYAKVVKKCALER
DFELLPFKDKTIVGERGASLSGGQKARISLARAVYRETSIYLLDDPLSAV
DTHVARHLFEQCMRGYLRERIVILATHQLQFLQHADQIVIMDKGRVSAVG
TYESLRESGLDFASMLADPERDEQSEERSRSRSGSYTHSHSDQRRNSEQS
LLSMADSCMDDLEAEQANNQERQEAGQIGLRLYSKYFKAGGGFFAFFVMM
GFCVLSQGLASLGDYFLSYWVTKKGNVAYRADNNDTTRSEELEPRLSTWL
RDIGLSVDAEMLDTYIFTVITVLTILVTVARSFLFFNLAMKASIRLHNSM
FRGITRAAMYFFNTNPSGRILNRFSKDMGQVDEILPAVMMDVIQIFLALA
GIVIVIAVVNPLFLIPTVVLGIIFYQLRTFYLKTSRDVKRMEAITRSPVY
SHLAASLTGLSTIRAFGAQRVLEAEFDNYQDMHSSAFYMFISTSRAFGYW
LDCFCVIYIAIITLSFFIFPPANGGDVGLAITQAMGMTGMVQWGMRQSAE
LENTMTAVERVVEYEDIEPEGALEAPADKKPPKSWPEQGKIVFDELSLRY
TPDPKSENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSYNDGSV
LIDKRDTSEMGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDDKLWR
SLEEVKLKEVVADLPSGLQSKITEGGTNFSVGQRQLVCLARAILRENRIL
VMDEATANVDPQTDGLIQTTIRNKFKECTVLTIAHRLHTIMDSDKVLVMD
AGRAVEFGTPYELLTLADSKVFHGMVKQTGHATYESLLKIAQKAFENRQN
HSLSSASFLDH
BO33455.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:45:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7627-PB | 1355 | CG7627-PB | 1..1355 | 1..1355 | 6894 | 100 | Plus |
| CG7627-PA | 1355 | CG7627-PA | 1..1355 | 1..1355 | 6894 | 100 | Plus |
| CG31792-PC | 1323 | CG31792-PC | 1..1319 | 1..1353 | 4602 | 68.1 | Plus |
| CG31792-PB | 1323 | CG31792-PB | 1..1319 | 1..1353 | 4602 | 68.1 | Plus |
| CG4562-PE | 1408 | CG4562-PE | 1..1328 | 1..1343 | 4550 | 66.9 | Plus |
