BO33502.complete Sequence
391 bp assembled on 2012-12-19
GenBank Submission: KX794353
> BO33502.complete
GAAGTTATCAGTCGACATGGCTCTTGTGAAACCGAAATCGGAGCTGACCC
CGGAGGAGCTGGCGCGGCAGGAGGAGGAGGAGTTTAACACCGGCCCGCTG
TCCGTGCTCACGCAGTCCGTGAAGAACAACACCCAGGTGCTCATCAACTG
CCGCAACAACAAGAAGCTGCTGGGCAGGGTAAAGGCCTTCGATCGGCACT
GCAACATGGTACTGGAAAACGTGAAGGAGATGTGGACGGAGCTGCCGCGG
ACCGGTAAGGGCAAGAAGAAGGTGAAGCCCGTGAACAAGGATCGGTTCAT
ATCGAAGATGTTCCTGCGAGGCGATTCTGTCATCCTGGTCCTAAGGAATC
CCCTGGCCACGGCGGCCGGCAAGGCAAGCTTTCTAGACCAT
BO33502.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:00:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmD2-RA | 360 | CG1249-PA | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmD2-RA | 778 | CG1249-RA | 140..496 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6345282..6345636 | 373..19 | 1775 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:00:38 has no hits.
BO33502.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-19 16:42:48 Download gff for
BO33502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmD2-RA | 149..505 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:26 Download gff for
BO33502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmD2-RA | 140..496 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:12 Download gff for
BO33502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmD2-RA | 140..496 | 17..375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:12 Download gff for
BO33502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6345280..6345638 | 17..375 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:26 Download gff for
BO33502.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2171002..2171360 | 17..375 | 99 | | Minus |
BO33502.pep Sequence
Translation from 16 to 391
> BO33502.pep
MALVKPKSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKK
LLGRVKAFDRHCNMVLENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFL
RGDSVILVLRNPLATAAGKASFLDH
BO33502.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmD2-PA | 119 | CG1249-PA | 1..119 | 1..119 | 608 | 100 | Plus |