BO33504.complete Sequence
1264 bp assembled on 2013-01-15
GenBank Submission: KX799364
> BO33504.complete
GAAGTTATCAGTCGACATGAAGCGAAATCGTCGTGCATTTGCTGGAAACA
ACAAGCCATTTGTCTTTGGAGGCATTTACAATCCCAATGCCACCGTCAAG
CCTTTGATCCAAATGCCGTTGCAGGCCGCCAATGTCCAGGAGCAGCAGTC
TTCTCCGGTGGCTTTATATCCGACATCGGCCTCCCCGGTGGCTGTTCAAT
CGCCACAGGACGCATTTTTGGCTGTTCAGTCGCCAGGGGCTCCTGCCCCC
GTTCAACTGGCCAACTCGTCCGACCAGCAGAATAATCCGGATGCGGACGC
CATTGCCTCCAAACTGCCCATGCCAGTTATCATCAAGGAGGAGCCGATCT
CTGTCAACGATGAACCGTCCGTCGACAATATAGAGGACAATACCAGTGCC
AGTACCAGTGCCAGCGGCATCGGGGGCAAGATCCCATTTAAAAAAATCTT
CCAAAAGCGCAAGAAGTCGTCTGAACGCACTCGGGACAAGAAGTTGCGAC
AGAACCGCCAGCTGCGCAAGTCCATGCTCCCCAAGAACGCTCTGATGGCC
CTCAACGAGGTGAAGGGCGTGACCATCAGCGATTTCACCATCGACAGCAA
TACCGACGGGGGATTCACGGCCGTTGTCACTGTCAACTCGAATCAGTACG
AGGGCAAGGGTACCTCGAAAATGACAGCCAAGAACGCGGCCTGCGAGAAG
GCTTGGCGCGATTTTATTATTGCAAAAATGACCCCCAAGCCGCCCCGTAT
TCACCAGGTGGAGATGGGTTCGGAGCCAATGGATATCAACGAGGATGAGG
CCGATGCACCGGATGATGATCTGCCCATGTTGAATCTGGCCTCGTTTGCC
ATCTACAAGCTGTTCGCGGAGTGGGAACGGGAGGGCTATGTCGTGCCCGA
GATGCACCCTTCGGCCAATGCTGCCCAACAGGCGGGAGGGGATGCCGGAA
CTCCAGTTCCCCCCGTGCCGAAGGAGCCAAAGAAGCCGCCAGTGCGCACC
GAGCTACCCTCTGGCTGGGAGACCATGCACCCGGCGACCATTCTTTGCAT
TATGCGTCCGGGACTCAACTACGTGGACTACGGGTCATCTGGCGACAAGA
CCAACGGCATGCAGCATCTGGGAATCATGGTGGACAACCAGGAGTTCCAC
GCCAACGGCAGATCAAAGAAAATCGCCCGTCGCAACGTGGCCGTGAAAGT
GTGCAACTCTCTGTTCGGCACCAACTTCACCTACAGCGACACCACTGCAA
GCTTTCTAGACCAT
BO33504.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:09:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DIP1-RD | 1233 | CG17686-PD | 1..1230 | 17..1246 | 6150 | 100 | Plus |
DIP1-RB | 1230 | CG17686-PB | 61..1227 | 80..1246 | 5835 | 100 | Plus |
DIP1-RI | 1137 | CG17686-PI | 1..1134 | 113..1246 | 5670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:09:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DIP1-RD | 2604 | CG17686-RD | 113..1342 | 17..1246 | 6150 | 100 | Plus |
DIP1-RI | 3477 | CG17686-RI | 1049..2215 | 80..1246 | 5835 | 100 | Plus |
DIP1-RG | 3195 | CG17686-RG | 1121..2287 | 80..1246 | 5835 | 100 | Plus |
DIP1-RI | 3477 | CG17686-RI | 113..175 | 17..79 | 315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:09:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21626313..21626891 | 1051..473 | 2895 | 100 | Minus |
X | 23542271 | X | 21628361..21628754 | 473..80 | 1970 | 100 | Minus |
X | 23542271 | X | 21626058..21626252 | 1246..1052 | 975 | 100 | Minus |
X | 23542271 | X | 21629974..21630036 | 79..17 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:09:02 has no hits.
BO33504.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-15 17:08:45 Download gff for
BO33504.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DIP1-RD | 123..1352 | 17..1248 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:20 Download gff for
BO33504.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DIP1-RD | 123..1352 | 17..1248 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:22:11 Download gff for
BO33504.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DIP1-RD | 113..1342 | 17..1248 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:22:11 Download gff for
BO33504.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21626056..21626252 | 1052..1248 | 98 | <- | Minus |
X | 21626313..21626890 | 474..1051 | 100 | <- | Minus |
X | 21628361..21628754 | 80..473 | 100 | <- | Minus |
X | 21629974..21630036 | 17..79 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:20 Download gff for
BO33504.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 21497083..21497279 | 1052..1248 | 98 | <- | Minus |
arm_X | 21497340..21497917 | 474..1051 | 100 | <- | Minus |
arm_X | 21499388..21499781 | 80..473 | 100 | <- | Minus |
arm_X | 21501001..21501063 | 17..79 | 100 | | Minus |
BO33504.pep Sequence
Translation from 16 to 1264
> BO33504.pep
MKRNRRAFAGNNKPFVFGGIYNPNATVKPLIQMPLQAANVQEQQSSPVAL
YPTSASPVAVQSPQDAFLAVQSPGAPAPVQLANSSDQQNNPDADAIASKL
PMPVIIKEEPISVNDEPSVDNIEDNTSASTSASGIGGKIPFKKIFQKRKK
SSERTRDKKLRQNRQLRKSMLPKNALMALNEVKGVTISDFTIDSNTDGGF
TAVVTVNSNQYEGKGTSKMTAKNAACEKAWRDFIIAKMTPKPPRIHQVEM
GSEPMDINEDEADAPDDDLPMLNLASFAIYKLFAEWEREGYVVPEMHPSA
NAAQQAGGDAGTPVPPVPKEPKKPPVRTELPSGWETMHPATILCIMRPGL
NYVDYGSSGDKTNGMQHLGIMVDNQEFHANGRSKKIARRNVAVKVCNSLF
GTNFTYSDTTASFLDH
BO33504.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DIP1-PD | 410 | CG17686-PD | 1..410 | 1..410 | 2135 | 100 | Plus |
DIP1-PC | 395 | CG17686-PC | 1..395 | 1..410 | 2031 | 96.3 | Plus |
DIP1-PB | 409 | CG17686-PB | 19..409 | 20..410 | 2022 | 99.5 | Plus |
DIP1-PI | 378 | CG17686-PI | 1..378 | 33..410 | 1964 | 100 | Plus |
DIP1-PG | 378 | CG17686-PG | 1..378 | 33..410 | 1964 | 100 | Plus |