Clone BO33504 Report

Search the DGRC for BO33504

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:335
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptDIP1-RD
Protein status:BO33504.pep: Imported from assembly
Sequenced Size:1264

Clone Sequence Records

BO33504.complete Sequence

1264 bp assembled on 2013-01-15

GenBank Submission: KX799364

> BO33504.complete
GAAGTTATCAGTCGACATGAAGCGAAATCGTCGTGCATTTGCTGGAAACA
ACAAGCCATTTGTCTTTGGAGGCATTTACAATCCCAATGCCACCGTCAAG
CCTTTGATCCAAATGCCGTTGCAGGCCGCCAATGTCCAGGAGCAGCAGTC
TTCTCCGGTGGCTTTATATCCGACATCGGCCTCCCCGGTGGCTGTTCAAT
CGCCACAGGACGCATTTTTGGCTGTTCAGTCGCCAGGGGCTCCTGCCCCC
GTTCAACTGGCCAACTCGTCCGACCAGCAGAATAATCCGGATGCGGACGC
CATTGCCTCCAAACTGCCCATGCCAGTTATCATCAAGGAGGAGCCGATCT
CTGTCAACGATGAACCGTCCGTCGACAATATAGAGGACAATACCAGTGCC
AGTACCAGTGCCAGCGGCATCGGGGGCAAGATCCCATTTAAAAAAATCTT
CCAAAAGCGCAAGAAGTCGTCTGAACGCACTCGGGACAAGAAGTTGCGAC
AGAACCGCCAGCTGCGCAAGTCCATGCTCCCCAAGAACGCTCTGATGGCC
CTCAACGAGGTGAAGGGCGTGACCATCAGCGATTTCACCATCGACAGCAA
TACCGACGGGGGATTCACGGCCGTTGTCACTGTCAACTCGAATCAGTACG
AGGGCAAGGGTACCTCGAAAATGACAGCCAAGAACGCGGCCTGCGAGAAG
GCTTGGCGCGATTTTATTATTGCAAAAATGACCCCCAAGCCGCCCCGTAT
TCACCAGGTGGAGATGGGTTCGGAGCCAATGGATATCAACGAGGATGAGG
CCGATGCACCGGATGATGATCTGCCCATGTTGAATCTGGCCTCGTTTGCC
ATCTACAAGCTGTTCGCGGAGTGGGAACGGGAGGGCTATGTCGTGCCCGA
GATGCACCCTTCGGCCAATGCTGCCCAACAGGCGGGAGGGGATGCCGGAA
CTCCAGTTCCCCCCGTGCCGAAGGAGCCAAAGAAGCCGCCAGTGCGCACC
GAGCTACCCTCTGGCTGGGAGACCATGCACCCGGCGACCATTCTTTGCAT
TATGCGTCCGGGACTCAACTACGTGGACTACGGGTCATCTGGCGACAAGA
CCAACGGCATGCAGCATCTGGGAATCATGGTGGACAACCAGGAGTTCCAC
GCCAACGGCAGATCAAAGAAAATCGCCCGTCGCAACGTGGCCGTGAAAGT
GTGCAACTCTCTGTTCGGCACCAACTTCACCTACAGCGACACCACTGCAA
GCTTTCTAGACCAT

BO33504.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
DIP1-RD 1233 CG17686-PD 1..1230 17..1246 6150 100 Plus
DIP1-RB 1230 CG17686-PB 61..1227 80..1246 5835 100 Plus
DIP1-RI 1137 CG17686-PI 1..1134 113..1246 5670 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
DIP1-RD 2604 CG17686-RD 113..1342 17..1246 6150 100 Plus
DIP1-RI 3477 CG17686-RI 1049..2215 80..1246 5835 100 Plus
DIP1-RG 3195 CG17686-RG 1121..2287 80..1246 5835 100 Plus
DIP1-RI 3477 CG17686-RI 113..175 17..79 315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21626313..21626891 1051..473 2895 100 Minus
X 23542271 X 21628361..21628754 473..80 1970 100 Minus
X 23542271 X 21626058..21626252 1246..1052 975 100 Minus
X 23542271 X 21629974..21630036 79..17 315 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:09:02 has no hits.

BO33504.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-15 17:08:45 Download gff for BO33504.complete
Subject Subject Range Query Range Percent Splice Strand
DIP1-RD 123..1352 17..1248 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:20 Download gff for BO33504.complete
Subject Subject Range Query Range Percent Splice Strand
DIP1-RD 123..1352 17..1248 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:22:11 Download gff for BO33504.complete
Subject Subject Range Query Range Percent Splice Strand
DIP1-RD 113..1342 17..1248 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:22:11 Download gff for BO33504.complete
Subject Subject Range Query Range Percent Splice Strand
X 21626056..21626252 1052..1248 98 <- Minus
X 21626313..21626890 474..1051 100 <- Minus
X 21628361..21628754 80..473 100 <- Minus
X 21629974..21630036 17..79 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:20 Download gff for BO33504.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21497083..21497279 1052..1248 98 <- Minus
arm_X 21497340..21497917 474..1051 100 <- Minus
arm_X 21499388..21499781 80..473 100 <- Minus
arm_X 21501001..21501063 17..79 100   Minus

BO33504.pep Sequence

Translation from 16 to 1264

> BO33504.pep
MKRNRRAFAGNNKPFVFGGIYNPNATVKPLIQMPLQAANVQEQQSSPVAL
YPTSASPVAVQSPQDAFLAVQSPGAPAPVQLANSSDQQNNPDADAIASKL
PMPVIIKEEPISVNDEPSVDNIEDNTSASTSASGIGGKIPFKKIFQKRKK
SSERTRDKKLRQNRQLRKSMLPKNALMALNEVKGVTISDFTIDSNTDGGF
TAVVTVNSNQYEGKGTSKMTAKNAACEKAWRDFIIAKMTPKPPRIHQVEM
GSEPMDINEDEADAPDDDLPMLNLASFAIYKLFAEWEREGYVVPEMHPSA
NAAQQAGGDAGTPVPPVPKEPKKPPVRTELPSGWETMHPATILCIMRPGL
NYVDYGSSGDKTNGMQHLGIMVDNQEFHANGRSKKIARRNVAVKVCNSLF
GTNFTYSDTTASFLDH

BO33504.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:04:34
Subject Length Description Subject Range Query Range Score Percent Strand
DIP1-PD 410 CG17686-PD 1..410 1..410 2135 100 Plus
DIP1-PC 395 CG17686-PC 1..395 1..410 2031 96.3 Plus
DIP1-PB 409 CG17686-PB 19..409 20..410 2022 99.5 Plus
DIP1-PI 378 CG17686-PI 1..378 33..410 1964 100 Plus
DIP1-PG 378 CG17686-PG 1..378 33..410 1964 100 Plus