BO33508.complete Sequence
631 bp assembled on 2012-12-19
GenBank Submission: KX799453
> BO33508.complete
GAAGTTATCAGTCGACATGACGATCGGCAAGAACAACAAAATGATTCAGC
ACCTGAATTATCGGGTGCGAATCGTGCTGCAGGACTCGCGTACCTTCATC
GGTACCTTCAAAGCCTTCGACAAACACATGAACTTGATCCTCGGCGACTG
CGAGGAGTTCCGGAAGATTCGCTCGAAGAATTCCAAGGTGCCCGAGCGCG
AGGAGAAGCGCGTGCTGGGCTTTGTATTGCTGCGCGGCGAGAACATAGTT
TCACTGACGGTGGAGGGACCACCGCCGCCAGAGGAGGGCCTGCCCCGAGT
TCCCATTCCGGGAGCAGCTCCTGGTCCGGGAATCGGTCGCGTGGCCGGAC
GCGGAATGCCTATCAACTTGTCCGCCGTGCCAGCGGGTCTCCAGGGTCCC
GTGAGAGGTGTGGGCGGACCCGCCCAACAGCACATGGCTCCGATGGGACG
AGGAGTGCCACGAGCACCGATGATGGGTGCACCGCCACCGGGCATGATTC
CCGGCGGCATGCCCTCGATGCCAGGAAACATGGGACGCGGTGCTCCGCCA
CCGATGCGCGGACCGCCGCCCAGCATGATCCGTGGAGCACCACCACCGGG
CAGGGGTGGCTATGCAAGCTTTCTAGACCAT
BO33508.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:00:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmB-RB | 600 | CG5352-PB | 1..597 | 17..613 | 2985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmB-RB | 776 | CG5352-RB | 132..728 | 17..613 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10425531..10426125 | 613..19 | 2975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:00:48 has no hits.
BO33508.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-19 16:42:49 Download gff for
BO33508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmB-RA | 296..892 | 17..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:30 Download gff for
BO33508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmB-RB | 132..728 | 17..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:16 Download gff for
BO33508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SmB-RB | 132..728 | 17..615 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:16 Download gff for
BO33508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10425529..10426126 | 17..615 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:30 Download gff for
BO33508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10425529..10426126 | 17..615 | 99 | | Minus |
BO33508.pep Sequence
Translation from 16 to 631
> BO33508.pep
MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRK
IRSKNSKVPEREEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGA
APGPGIGRVAGRGMPINLSAVPAGLQGPVRGVGGPAQQHMAPMGRGVPRA
PMMGAPPPGMIPGGMPSMPGNMGRGAPPPMRGPPPSMIRGAPPPGRGGYA
SFLDH
BO33508.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SmB-PB | 199 | CG5352-PB | 1..199 | 1..199 | 1069 | 100 | Plus |