BO33528.complete Sequence
853 bp assembled on 2012-12-19
GenBank Submission: KX798891
> BO33528.complete
GAAGTTATCAGTCGACATGAAGACTTTCGTTACTTCCTGGGCCGATGAGG
TGGATGCGGACTATGTGGATGGACTGCCGCCTTCTAATGAGTACATTAAG
GGCGACTTCAAGTACGTGACGGAGTATAAGTTCAACGATGATGGCAAGAA
GGTGAAAGTGGTGCGAACCTTCAAGATCGAGAAGCAGATTGTTCCGAAGG
CTGTGGCTCGTCGTCGCAACTGGGTTAAGTTTGGGGATTCGCGATCGGAC
AAGCCCGGACCCAATTCCCAGACGACAATGGCCTCCGAGGAGATCTTTAT
GCAATTCATCGGCTCCAAAGATTTCGACCAGACCCACGAAACCCAACTTG
ATCCCGGCAAGAACATCGCCAAGTGCCGCATTTGCAATGGCGAACACTGG
AGTGTCAATTGTCCCTACAAGGGCACCTCGATGGATAGCAAAACCGTGAT
GGAAACCAAGGCCAATGCCGCTGCAGCTGCCGCTATAAGTGATCCCAGCA
AGACCGGAAAATATGTACCACCCTTCATGAAGGACGGCGGAGGCATATCT
GGCAGCAAAAATTGGGGACGGGGTCGGGATCGGGACGATTCGTCGGCAGT
TCGCATCTCAAACCTATCCGAATCCATGACCGAGACTGATCTCGAGGAGC
TGGTAAAGAAAATCGGACCACACACCAAGATGTATTTGGCGCGCGAAAAA
AACAGCGGCCTCTGCAAGGGATTCGCCTACGTGCACTTCAAGTTCCGCCA
GGATGCAGCTGCCGCCATTGAGGTTCTTAATGGCCACGGCTACGACCACT
TGATCCTCTGCGTCGAGTGGTCCAAGCCTCAGCCGGCAAGCTTTCTAGAC
CAT
BO33528.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10881-RA | 822 | CG10881-PA | 1..819 | 17..835 | 4095 | 100 | Plus |
| CG8636-RA | 810 | CG8636-PA | 595..801 | 626..832 | 570 | 85 | Plus |
| CG8636-RA | 810 | CG8636-PA | 100..425 | 110..435 | 370 | 74.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:01:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10881-RA | 979 | CG10881-RA | 63..881 | 17..835 | 4095 | 100 | Plus |
| CG8636-RA | 1027 | CG8636-RA | 686..892 | 626..832 | 570 | 85 | Plus |
| CG8636-RA | 1027 | CG8636-RA | 191..516 | 110..435 | 370 | 74.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:01:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20408327..20409145 | 17..835 | 4095 | 100 | Plus |
| X | 23542271 | X | 2609382..2609588 | 832..626 | 570 | 85 | Minus |
| X | 23542271 | X | 2609758..2610083 | 435..110 | 370 | 74.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:01:03 has no hits.
BO33528.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-19 16:42:51 Download gff for
BO33528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10881-RA | 63..881 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:36 Download gff for
BO33528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10881-RA | 63..881 | 17..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:22 Download gff for
BO33528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10881-RA | 63..881 | 17..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:22 Download gff for
BO33528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20408327..20409145 | 17..837 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:36 Download gff for
BO33528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16234049..16234867 | 17..837 | 99 | | Plus |
BO33528.pep Sequence
Translation from 16 to 853
> BO33528.pep
MKTFVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVR
TFKIEKQIVPKAVARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGS
KDFDQTHETQLDPGKNIAKCRICNGEHWSVNCPYKGTSMDSKTVMETKAN
AAAAAAISDPSKTGKYVPPFMKDGGGISGSKNWGRGRDRDDSSAVRISNL
SESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHFKFRQDAAAA
IEVLNGHGYDHLILCVEWSKPQPASFLDH
BO33528.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10881-PA | 273 | CG10881-PA | 1..273 | 1..273 | 1461 | 100 | Plus |
| CG8636-PA | 269 | CG8636-PA | 4..267 | 1..272 | 989 | 70 | Plus |
