BO33630.complete Sequence
2962 bp assembled on 2013-04-18
GenBank Submission: KX794666
> BO33630.complete
GAAGTTATCAGTCGACATGGCGGACAGTGAAGAAGCAGTGAAACGTGGCC
GTCGCCAGGGCAGAAAGAAGGCACAACCTATGCCGGAACAGGCGGTAGTG
TTGGTGGTCAATGGCCGAGTGACCGGTGGGCCGAAGGGAACTGGCAAACA
GAAGACTCGACCGGGCAAGAACGCGAAAGCCGACGCGGGCGACAAGCTGA
AGTCCGAGGACGAAAAGATGCTCCGCCAACTGGTCGACGACTTCCTGCAG
AGCTGCGAGCCAGAGAAACAGCTCCCCGGACTTACAAAAGCCCAGCGCAG
CCACGTTCACCGATTGGCCCAGCATCGCGGGCTTAAGACGGTGAGCAAGG
GTCCAGAGGAGAACCGCGTCCTTTTTATAAGTCGCCCACAGTCGGATGGC
CAACAGCAATACATTCTTTGCAACACAAAGCTGGACATTTGTCCGCCGCT
CCTAGACGTTCTGGGACAAATGGCCGGCAATGTGGAACGCAGATTGATGA
ACTCCGTTGGAGACTTAAAGTGCAACAAACAGCAATATAAGGATATACGG
CTTCCTTCCAACTTCGGCCTGGTCGGGCAGAGGCTTATTCCGCCGCCGCA
GAGCAACCGGAACAGGAACATTCAGCACGAGCGCCGGAGCCTGCCCATCT
ACAAGCAGCGGGAGAGCATCCTCAACGTTCTGCAGCGCGATCAGGTTTTG
ATCATTAAAGGAGCCACCGGCTCTGGCAAGTCCACCCAACTTCCCCAGTA
CATCCTTGAGTGGGCCGCAGAGCATCGTGCTCCAGTCAGGATCGTGGTAA
GTCAGCCTCGCCGCATAGCAGCTATCAGTGTCTCGGAGCGCATTTCCAAG
GAGCGCGGTGAGGCGCCTGGCACCACAGTGGGCTATAATATTCGCATGAA
TAGACAATGCAGCAGCAACACGGTTCTAATGCTGACCACCAGTGGTTGCC
TTTTAAGGGCTCTCGCCATGGATAAGAAGTCTTTTTTTAAAAACACCACC
CACTTAATCATTGATGAAGCCCACGAGCGTGATTTGGACACAGACTTCCT
GCTGCTGGCCACCAAGCTGGAGCTGCAAAAGAATCCGCACCTTCGCCTCG
TGCTTATGTCGGCCACCATGGATCTTGAAGCATTGTCCAACTATTTTGGT
GGGGGCACTGTAATGGATGTGGAGGGGCGCAGCTTCGAGGTGTCGATCTA
TCATCTAGAGGACATTCTTAGTAAAACTGGGTACATGCACCCGAGAATGG
AGAAGTTTTTGGGCAAGCCGACAGGCAAAGAAACTCCTAGCGAACTACTA
GCCGCCTATTATGGAGGTAACACAATCGTACATCCGGATATCGACAATGA
CTTGATCGTTTCGCTATTGGAATTATTACTGCGCCAAGGTGACGCTGGAG
CGGTGATTGTGTACCTGCCAGGCTATAGCGATATGACCTCGCTACTGGCC
CGCTTGGAATCGTCTCTGCCGCGGGAACAGATTACTATCATACTGCTTCA
TAGCCAGGTGGACAACAGCGAGCAACGCAAGGTCTTCCGCACTTATCCTG
GCGTGCGTTTAAAGATTATTCTTAGTACCAACATAGGACAAACTTCGATC
ACCATTCCGGATCTACTCTATGTCATCGACACGGGCCTCGCCAAGATGAA
GACCTATGACTCGACCATAGATGCATCGCAGTTAACCCTCACGTGGATCT
CGCAGGCGGACGCCAAACAGCGTGCGGGAAGAGCTGGACGCGTGTGCCAT
GGCAATTGCTATCGTCTGTATGACAACGACCGCATGGCCAGAATGAATCT
GTACACCATCCCAGAGATCATGAGGCGTACCTTGGACGAGATATGTCTGC
TGACCAAGTTGGCAGCTCCAGACAAGAAAATAGAAAATTTTCTAGCTCTG
GCTTTGGATACCCCACCAAAGGATGCCGTAATGCAGTCCTGTTCTAGACT
GAAGCTATTGGGCGTGCTCGACGAACGGGACGAGGTCACGCCGCTGGGAC
ATATCGTTGCCGAACTGCCCTTAGGCGTTCAAATCGGCAAATGCCTGGTG
TACTCCATTTACTTGCGCTGCCTGGACAGCATGATCATAATTGCGGCCTA
CCACTCGGTGAGGGATCCCTTTGTTCTAAACATAGAGCGCGGCAAGAAAT
CAGGGCAGCAGATATCCAGAGTTCTTTTCGCTGGCGACGGAATGAGTGAT
TCGCTGGCGGTCATTAAACTCTACGAGGAGTTCACCAACTTAAAGCGCAA
GGACATCGGCGATTTTTGCGAGCGCAATTTTATTTGCCGTAACGCAATGG
AGATGTTCGTCTCGGCGGCGAGTACTCTACGCGACACCGTGTACCGTATC
TTCCGCTTTAGCGAGGCCAGTGCTCGTTTGGCCTCGTCCTTCAACAATGA
TACGAATATGATCCGCCTGGCCCTGACTGCAGGACTGTATCCCAAGTTGG
CGTACATGGATCGCGAGAACAAGAACCAGCTGGTGGCTGAAGGAGATCCA
TTAGTTCAGGTTTCGAGAAGCTCTTGCCTTCGGGGCAAAAAGAAGCAAAA
GGATTTGGCCAGCGAGTGGATCCTGTTCGTTGAGAAGACCCGCACTGCTG
ACCAAATTTCCTCGCTAGAGCATACCACCTTGGTGAGCGGCTTGATGGTG
GCTCTGGCAGGCGGAAAACGGTTCATAACCGAGGCGCATGGGTCCGAAAT
GCTGCTGTGCTTGGACTCCTGGATCCGTTTGAAATGCCCAGCTGAATTTG
GACTCCAGCTCCATAAAGTGCGAATGCTAACGGATCGTGAATTCGCCAAG
TTGGTAGCGACGCGGAAGCTTAGTCTAATGAGCGATTTTATAGGGCCGGA
AACAGTTCGGCGGTTGTTGGAGGCGGATGTGCCCTCGACTTGCCTGGCCG
AGGGCAAAAGCCTTCTGGACAGAGACAACTGTGATAACGACTTCGCAAGC
TTTCTAGACCAT
BO33630.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:14:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8915-RB | 2931 | CG8915-PB | 1..2928 | 17..2944 | 14640 | 100 | Plus |
| CG8915-RA | 2931 | CG8915-PA | 1..2928 | 17..2944 | 14640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:14:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8915-RB | 4371 | CG8915-RB | 91..3018 | 17..2944 | 14640 | 100 | Plus |
| CG8915-RA | 3572 | CG8915-RA | 91..3018 | 17..2944 | 14640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:14:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17241821..17243862 | 2944..903 | 10210 | 100 | Minus |
| X | 23542271 | X | 17244232..17244911 | 696..17 | 3400 | 100 | Minus |
| X | 23542271 | X | 17243923..17244134 | 903..692 | 1060 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:14:32 has no hits.
BO33630.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 14:42:32 Download gff for
BO33630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8915-RA | 102..3029 | 17..2946 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:33 Download gff for
BO33630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8915-RA | 91..3018 | 17..2946 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:24:08 Download gff for
BO33630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8915-RA | 91..3018 | 17..2946 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:24:08 Download gff for
BO33630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17241818..17243862 | 903..2946 | 99 | <- | Minus |
| X | 17243924..17244131 | 695..902 | 100 | <- | Minus |
| X | 17244234..17244911 | 17..694 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:33 Download gff for
BO33630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17135851..17137895 | 903..2946 | 99 | <- | Minus |
| arm_X | 17137957..17138164 | 695..902 | 100 | <- | Minus |
| arm_X | 17138267..17138944 | 17..694 | 100 | | Minus |
BO33630.pep Sequence
Translation from 16 to 2962
> BO33630.pep
MADSEEAVKRGRRQGRKKAQPMPEQAVVLVVNGRVTGGPKGTGKQKTRPG
KNAKADAGDKLKSEDEKMLRQLVDDFLQSCEPEKQLPGLTKAQRSHVHRL
AQHRGLKTVSKGPEENRVLFISRPQSDGQQQYILCNTKLDICPPLLDVLG
QMAGNVERRLMNSVGDLKCNKQQYKDIRLPSNFGLVGQRLIPPPQSNRNR
NIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWA
AEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSS
NTVLMLTTSGCLLRALAMDKKSFFKNTTHLIIDEAHERDLDTDFLLLATK
LELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLEDI
LSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDIDNDLIVSL
LELLLRQGDAGAVIVYLPGYSDMTSLLARLESSLPREQITIILLHSQVDN
SEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDST
IDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPE
IMRRTLDEICLLTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGV
LDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRD
PFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYEEFTNLKRKDIGDF
CERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLASSFNNDTNMIR
LALTAGLYPKLAYMDRENKNQLVAEGDPLVQVSRSSCLRGKKKQKDLASE
WILFVEKTRTADQISSLEHTTLVSGLMVALAGGKRFITEAHGSEMLLCLD
SWIRLKCPAEFGLQLHKVRMLTDREFAKLVATRKLSLMSDFIGPETVRRL
LEADVPSTCLAEGKSLLDRDNCDNDFASFLDH
BO33630.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8915-PB | 976 | CG8915-PB | 1..976 | 1..976 | 4979 | 100 | Plus |
| CG8915-PA | 976 | CG8915-PA | 1..976 | 1..976 | 4979 | 100 | Plus |
| CG1582-PB | 1288 | CG1582-PB | 432..1235 | 188..906 | 867 | 31.4 | Plus |
| mle-PC | 936 | CG11680-PC | 15..751 | 197..915 | 790 | 30.8 | Plus |
| mle-PA | 1293 | CG11680-PA | 372..1108 | 197..915 | 790 | 30.8 | Plus |
