BO33702.complete Sequence
2026 bp assembled on 2013-04-18
GenBank Submission: KX800064
> BO33702.complete
GAAGTTATCAGTCGACATGTCGGACAGCACAGTGGCCGCATCTGCGTCGG
CCTCCGCCTCATCGTCCGCGAAGTCGAGCCTCAGCGATCTGCGTCAGTTC
CGCATCAACAAGAATGCTTCCTCTGTCGTCGCTAGTCCTTCGAGAACTGA
GCGTGTGCCTGGAAAGAAGCGCATCCAGGTGATGGCCGATAGTGACAGCG
ATGGCAACGACTCCCAGACGCCCAAGAAGACCAAACTGGAGCTGACCGTT
AAGGAAAAGGAGGAGCGCTACATGGCAGCCGCCAAGATTTCGCCCCACTT
TGACACAATGGCCATCCAGGAGTCTCTTTCCCGCACCAATTGGGATGTGG
CCGCTTCCGTGCGATACCTAAGGGAGAACTGCAAGCCCAAGGGGCACAAT
GGACCACTGGCCAAGTCCAAGCTGAAACCCAGGTCAAACGGAATTAGTGG
AGGCAACTTCTCGGATAACGACCATTCGGACGACGATGATGTGAAGCAGT
CCAAGGACCAGGTGTATGATAGCGATGACAGCGATAGCGAGATGTCCACC
AAGATGACGGGGCAACGTAAAAAAGTTTTCCAGTTTATGAACGAGGCTTC
GCTAATTGAACTCCAGTCAGTTAAAACGCTGTCCGAGAAGAAGGCATTAG
CCATCATTGATGTGCGACCATTTAGTGATTGGTCTGATTTGCGCCAAAAG
CTGGAGAGCATCAGGATGTCGGGTGATCTTTTGAATTACGCTCAAGAGCT
GATTAACAAACAGAACACGGTGGCCGCTATTCTAAGTAAGTGCAATAACA
TGGTGTCGCGTCTGGAGAAGGCGATTTCCAATGGTGCTGGCATTGTGGAG
CAACCTAAGCTTCTTAGCAGCGGTCTACAGCTGGCTGATTATCAGATAAT
TGGCCTTAATTGGCTCACCGTAATGCACAAACAAGAAATGAATGGCATTT
TGGCAGATGAAATGGGTCTGGGCAAGACAATTCAGGTTATTGCATTTCTG
GCCTATCTAAAGGAGAATGGTCTTAGCCAGGCTGCACATTTAATTGTGGT
GCCCTCGTCCACGCTGGATAATTGGGAGGCAGAGATTAGCCGCTGGTGTC
CCGAACTGGTGGTGGAGAAGTACCATGGCTCGCAGGACGAGCGAAGGAGA
ATGCGAGGCCGCTTTGCCAAGGATGGATTTACCGGCTTTGATGTTCTTCT
GACCACATATCACATTGTGGGATCCACGCCGGAGGAGAGGAAAATGTTCC
GGGTTTGCAAGTTGGACTACGTCATTTTTGATGAAGCCCATATGCTGAAG
AACATGACCACGCAACGCTATGCTAACCTTATAACCATAAACGCTAGGAT
GCGAATCCTGCTCACTGGAACTCCGCTGCAGAACAATCTGCTGGAGCTAA
TCTCTCTGCTCTGCTTCGTGATGCCCAAATTCTTTGCCAAGAGCATTGAG
GACATAAAATCGTTGTTTGCTAAGAAGGGAAAAAGCGATGGAGATCAGGA
TGAGGTTTCACAGTTCCAGGAAACACAAATCCAGAGAGCAAAGCGTATCA
TGAAGCCATTTGTACTCAGACGGCTTAAGAAAGATGTCCTTAAGAACCTG
CCCAAGAAGCTAAGCCTGGTGGAAAAAGTGCCCATGAGCAGTCAACAGAA
AATATACTATCACGAGCTGGTCGATTATTATTCCAATAACAAGGGCGAGG
TGTGCAGCAGCAGCGAAAGGGCCGGCATAGCGATCATGATGGAGATGCGC
CGCATTGCAAACCATCCGTTGCTGATGCGTCACTACTTCACCGACGCCAA
TCTACGTGGATTCTCTAAGCGCCTGGCTAATGCCAGTTCCTTTAAAAAGA
CCAACGAGCAATACATCTTTGAAGAGCTAGCCGTTATGTCAGACTTTCAG
GTCTATCAGATGATGAACAAGCATGTAAGTGACTATCAAAGAGGTTGTCC
AATGACAATGACTAAATTTGTGCATCTTTCAGGAGTTTTACGACGTGAAA
ATACCCGAGCAAGCTTTCTAGACCAT
BO33702.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:16:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Etl1-RA | 2535 | CG5899-PA | 1..1909 | 17..1925 | 9545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:16:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Etl1-RA | 3076 | CG5899-RA | 133..2041 | 17..1925 | 9545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:16:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9911209..9911772 | 873..310 | 2820 | 100 | Minus |
| 2L | 23513712 | 2L | 9909840..9910227 | 2008..1621 | 1940 | 100 | Minus |
| 2L | 23513712 | 2L | 9910817..9911150 | 1206..873 | 1670 | 100 | Minus |
| 2L | 23513712 | 2L | 9910489..9910763 | 1474..1200 | 1345 | 99.3 | Minus |
| 2L | 23513712 | 2L | 9912124..9912286 | 311..149 | 815 | 100 | Minus |
| 2L | 23513712 | 2L | 9910285..9910434 | 1622..1473 | 750 | 100 | Minus |
| 2L | 23513712 | 2L | 9912344..9912476 | 149..17 | 665 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:16:18 has no hits.
BO33702.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 14:54:30 Download gff for
BO33702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5899-RB | 110..2101 | 17..2010 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:02 Download gff for
BO33702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Etl1-RA | 133..2041 | 17..1925 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:24:57 Download gff for
BO33702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Etl1-RA | 133..2041 | 17..1925 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:24:57 Download gff for
BO33702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9912344..9912476 | 17..149 | 100 | | Minus |
| 2L | 9909838..9910226 | 1622..2010 | 99 | <- | Minus |
| 2L | 9910286..9910432 | 1475..1621 | 100 | <- | Minus |
| 2L | 9910489..9910756 | 1207..1474 | 100 | <- | Minus |
| 2L | 9910817..9911149 | 874..1206 | 100 | <- | Minus |
| 2L | 9911209..9911771 | 311..873 | 100 | <- | Minus |
| 2L | 9912125..9912285 | 150..310 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:02 Download gff for
BO33702.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9909838..9910226 | 1622..2010 | 99 | <- | Minus |
| arm_2L | 9910286..9910432 | 1475..1621 | 100 | <- | Minus |
| arm_2L | 9910489..9910756 | 1207..1474 | 100 | <- | Minus |
| arm_2L | 9910817..9911149 | 874..1206 | 100 | <- | Minus |
| arm_2L | 9911209..9911771 | 311..873 | 100 | <- | Minus |
| arm_2L | 9912125..9912285 | 150..310 | 100 | <- | Minus |
| arm_2L | 9912344..9912476 | 17..149 | 100 | | Minus |
BO33702.pep Sequence
Translation from 16 to 2026
> BO33702.pep
MSDSTVAASASASASSSAKSSLSDLRQFRINKNASSVVASPSRTERVPGK
KRIQVMADSDSDGNDSQTPKKTKLELTVKEKEERYMAAAKISPHFDTMAI
QESLSRTNWDVAASVRYLRENCKPKGHNGPLAKSKLKPRSNGISGGNFSD
NDHSDDDDVKQSKDQVYDSDDSDSEMSTKMTGQRKKVFQFMNEASLIELQ
SVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQELINKQN
TVAAILSKCNNMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWL
TVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTL
DNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTTYHI
VGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLT
GTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQF
QETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHE
LVDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLMRHYFTDANLRGFS
KRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHVSDYQRGCPMTMTK
FVHLSGVLRRENTRASFLDH
BO33702.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Etl1-PA | 844 | CG5899-PA | 1..636 | 1..636 | 3222 | 100 | Plus |
| dom-PE | 2497 | CG9696-PE | 680..1200 | 7..584 | 547 | 29.6 | Plus |
| dom-PD | 3183 | CG9696-PD | 680..1200 | 7..584 | 547 | 29.6 | Plus |
| dom-PA | 3198 | CG9696-PA | 680..1200 | 7..584 | 547 | 29.6 | Plus |
| dom-PG | 3233 | CG9696-PG | 715..1235 | 7..584 | 547 | 29.6 | Plus |
