BO33706.complete Sequence
664 bp assembled on 2012-12-20
GenBank Submission: KX796317
> BO33706.complete
GAAGTTATCAGTCGACATGAAGGAAATAAAAAAGAAATCAAAGCCAAAAC
GCAAGCCCACTCGCATGGAAGTGGAGGAGAGTGAGCCTGAGATGCCGTTC
TCTTATAAGACGCAGCCAGATGAAGGTGAGTCTGTGAATGGGGAGGCACA
TACCTCGGATGACGGCGATGAAATGGAGCTGGCCACCTTCAAAGCCGCCA
GCAAGAAGGGTGTCATCTACATATCCAACCTACCCAAGCACATGACCTTG
ACCCGCCTGCGTGAAATCTTGGGCGAGTACGGTGCCATCGGCAGAGCTTT
CCTGCGGTCGCAGAAGCTGTCAAGAAAGCCTCATAATTTCCTCTTCGCCG
AGGGTTGGGTGGAATTCAAATCGAAACGTGTGGCCAAACAGATCGTTCCA
CTGCTCAACTACAAGCAGATATCCACGCACAAGAAGTCCCCATTTTATTA
CTCACTGTGGATCATGGAGTACCTGCCGCGCTTCAAGTGGGCCCGTCTAA
ACGAACTCATGAACATCGTGCCGGTCACCAACTCTCAGAACCATCTCAAG
TTCCTCAATAAGAAGGCGAAGAAGGCCAAGAAAGTTAAGAAAGCCAAGAA
GGCTCTGGCTGACAGACTTCTTGAGTTAGTGCTAGCCTCTAGCATCGCAA
GCTTTCTAGACCAT
BO33706.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:02:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10993-RA | 633 | CG10993-PA | 1..630 | 17..646 | 3150 | 100 | Plus |
| CG40813-RB | 642 | CG40813-PB | 201..639 | 202..646 | 1530 | 90.1 | Plus |
| CG41562-RA | 642 | CG41562-PA | 201..639 | 202..646 | 1515 | 89.9 | Plus |
| CG40813-RB | 642 | CG40813-PB | 1..175 | 17..203 | 480 | 85 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10993-RA | 715 | CG10993-RA | 39..668 | 17..646 | 3150 | 100 | Plus |
| CG40813-RB | 642 | CG40813-RB | 201..639 | 202..646 | 1530 | 90.1 | Plus |
| CG41562-RA | 642 | CG41562-RA | 201..639 | 202..646 | 1515 | 89.9 | Plus |
| CG40813-RB | 642 | CG40813-RB | 1..175 | 17..203 | 480 | 85 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13790385..13790707 | 646..324 | 1615 | 100 | Minus |
| X | 23542271 | X | 13790766..13791073 | 324..17 | 1540 | 100 | Minus |
| X | 23542271 | X | 22158322..22158642 | 326..646 | 1170 | 91 | Plus |
| X | 23542271 | X | 22163358..22163678 | 326..646 | 1170 | 91 | Plus |
| X | 23542271 | X | 22242007..22242327 | 326..646 | 1170 | 91 | Plus |
| X | 23542271 | X | 22168090..22168410 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22173076..22173396 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22177940..22178260 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22182928..22183248 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22187805..22188125 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22192708..22193028 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22197609..22197929 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22202618..22202938 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22212763..22213083 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22217814..22218134 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22227008..22227328 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22232005..22232325 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22237000..22237320 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22247035..22247355 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22252017..22252337 | 326..646 | 1155 | 90.7 | Plus |
| X | 23542271 | X | 22143493..22143813 | 326..646 | 1140 | 90.3 | Plus |
| X | 23542271 | X | 22148224..22148544 | 326..646 | 1140 | 90.3 | Plus |
| X | 23542271 | X | 22153277..22153597 | 326..646 | 1140 | 90.3 | Plus |
| X | 23542271 | X | 9086423..9086611 | 326..514 | 525 | 85.2 | Plus |
| X | 23542271 | X | 22192317..22192491 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22197218..22197392 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22202227..22202401 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22167699..22167873 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22143102..22143276 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22147833..22148007 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22152886..22153060 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22157931..22158105 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22162967..22163141 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22212372..22212546 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22217423..22217597 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22226617..22226791 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22231614..22231788 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22236609..22236783 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22241616..22241790 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22246644..22246818 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22251626..22251800 | 17..203 | 480 | 85 | Plus |
| X | 23542271 | X | 22143302..22143413 | 202..313 | 470 | 94.6 | Plus |
| X | 23542271 | X | 22148033..22148144 | 202..313 | 470 | 94.6 | Plus |
| X | 23542271 | X | 22158131..22158242 | 202..313 | 470 | 94.6 | Plus |
| X | 23542271 | X | 22163167..22163278 | 202..313 | 470 | 94.6 | Plus |
| X | 23542271 | X | 22167899..22168010 | 202..313 | 470 | 94.6 | Plus |
| X | 23542271 | X | 22177749..22177860 | 202..313 | 470 | 94.6 | Plus |
| X | 23542271 | X | 22187614..22187725 | 202..313 | 470 | 94.6 | Plus |
| X | 23542271 | X | 22192517..22192628 | 202..313 | 470 | 94.6 | Plus |
| X | 23542271 | X | 22217623..22217734 | 202..313 | 470 | 94.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:02:44 has no hits.
BO33706.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-20 11:59:31 Download gff for
BO33706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10993-RA | 32..661 | 17..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:05 Download gff for
BO33706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10993-RA | 39..668 | 17..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:20:02 Download gff for
BO33706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10993-RA | 39..668 | 17..648 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:20:02 Download gff for
BO33706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13790383..13790707 | 324..648 | 99 | <- | Minus |
| X | 13790767..13791073 | 17..323 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:05 Download gff for
BO33706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13684416..13684740 | 324..648 | 99 | <- | Minus |
| arm_X | 13684800..13685106 | 17..323 | 100 | | Minus |
BO33706.pep Sequence
Translation from 16 to 664
> BO33706.pep
MKEIKKKSKPKRKPTRMEVEESEPEMPFSYKTQPDEGESVNGEAHTSDDG
DEMELATFKAASKKGVIYISNLPKHMTLTRLREILGEYGAIGRAFLRSQK
LSRKPHNFLFAEGWVEFKSKRVAKQIVPLLNYKQISTHKKSPFYYSLWIM
EYLPRFKWARLNELMNIVPVTNSQNHLKFLNKKAKKAKKVKKAKKALADR
LLELVLASSIASFLDH
BO33706.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10993-PA | 210 | CG10993-PA | 1..210 | 1..210 | 1078 | 100 | Plus |
| CG40813-PB | 213 | CG40813-PB | 1..213 | 1..210 | 787 | 75.3 | Plus |
| CG41562-PA | 213 | CG41562-PA | 1..213 | 1..210 | 784 | 74.9 | Plus |
| CG32708-PA | 239 | CG32708-PA | 1..236 | 1..199 | 582 | 55.5 | Plus |
| CG32706-PA | 230 | CG32706-PA | 1..208 | 17..196 | 276 | 37.3 | Plus |
