BO33712.complete Sequence
2245 bp assembled on 2013-01-22
GenBank Submission: KX797926
> BO33712.complete
GAAGTTATCAGTCGACATGGTTAGCTCGGAGCCGAAAGGACCTGCTAACG
TGGCCAACACGGCCTCGCCCCTCAAGGCCCATGAATCGTCCGGCAAGCGC
GCCAACGGACAGAAGTTTAAGCCCGGTGGAGCAGGAGGCGCCAGGAAGTT
CGACAAATTCGGCGGAGGAGCAGGCAAGTCGTTTGTAAAGCCAGGCGCTG
GTGGTGCCAAGAAGTTCGACAAGTCTGGGCCCGGTGGCTTCAAGAAGTTT
GACAAATCCGGAGCCACCGGCGACAAGAGGCTTGGTGGCAACAAGTTCCG
CGGAAAACCACAAACACAGCCACAGGCGCCGGCGGAGGGCGAGAAACAGG
ACTGGAACAAGTTCAAGAAGGAGAAGAAGGACCTCAAGCTGAAGCGCAAG
AGTGCCAAGGACACCTACGAGATCAGCAAGGAGGCCAACCAGATCCACGA
GAAGTTGCGATGCCGCCGAACGGAGAACAAGGACAAGCTGGTGGAGCAGA
TATACAAGGTGCTCAACGTGGGCGACACTATTTCAAAGGTGGTGAAGGCC
CACGACACCGCCCGCGTGATCCAGAGCATGCTAAAGTACGCGTCGCCAGC
TCTGCGGGCCGAGATCTCTGAGAAGCTGCTTCCCTTCACCGTGGAGATGT
GCCAGTCGAAATACGCCCAGTTCTGCGTGCAACGGATGCTCAAGTACGGT
GCGCCAGCCACCAAAGCCAAGCTGGTGGACAGCCTGTACGGACATATAGT
GCGTTTGGCCGGACACAGCATCGGCAGTGGGCTGCTGGATTCGATGTATC
AGAGCGCCACACCCAATCAGCGCATCTATATGCGCCAGGAGTTCTACGGC
GATCTGTACCGGAAGGCCAAGGATTCGAATGTGAAGACTCTGAGCGACAC
CTATAAGGAGGCCACGAACATGAAGGCCTCCATTTTGGGGTCGGTTAAAG
CAAACCTGGATCATGTGGCCAACAAGCAGCTGGTGGACAGTGCGCTGGTG
CACGCCGTGATGCTGGAGTACCTGCGCGCCTGCGACGAAGATGAGGAGAA
GCTGGAGGAGACGGTCACTGCGTTTGCGGCTCTAGTGCCTCACATGCTGT
CCACCAAGGAGGGCAGCGAGGCGGCTGTTATATGCTTCTACAAGTCGACG
CCCAAGAATCGCAGAGCCATTATCAAGAATATCAAGGAGCACCTGCTAAA
GATCGCCAACCATGAGCACGGCCACGTGTTCCTCATCTCGCTGCTAAACG
CACTGGACGACACTAAGGCGACCAAGAAGGCAATTTACGATCACCTACAC
GGAGATCTAAAGGCGCTAATGAGCAGCCCGTACGGCCGACGAGTGATTCA
ATGGCTGGTGGCTCCGGGTGATACGACATGCTTCCATCCAGAGTTCATTC
GCACGGTGGAGGAGGGTCTAGCCTTTGGAAAAAAGGAGAAGGAGCTGCGT
CGCAAGGAGATCCTTGAGCAGATAGAGGCGCCGATTGCACAGTCCATCGC
CGAGGATGCCGCCTTTTGGCTGTCCAACAGCCACATCGGCCTGGTCACCG
GCGATATTCTTAATCACATTCAAGGCGAGTCCTATGAGAAGGCTGCTTCG
GCCCTTGCCCAAGTCGTCGTCCAACCGGAGTGGCGCATTTCAGCAGACGC
CGCCGGTCCGCAGCCGCAGGATAAGAAGAAGCCTCACAATGACGTGGAGG
CCATTATAGCCCAGGCCACCAAACAGCGCAGAAAACTGCTTTATGTCGAG
AGCAGCAGCGACGACGAAGATGAAGATGAAGATGAAGATGAGGAGAGCGA
CGATGAAGGAGACGAGAAGGAGCAGAAGGAGGCGGCCGCAGATGATGCCG
AACCCAAGGTGAAGAAAGCCAAAAAGGAGCCCAAAAAGCCAAAGGCAAAG
GAGGAGGAGCCGGCGGCTCCGTTGGTCTCCGGAATCGAGGAGGCCGGCAT
GCACATTGTATTGAAGAAGATACTCAAGAACGATGGCAAGCGAGAGGGCA
CCCCGTTCAGCCAACAGCTACTCCAAAACTTGTCCTCCGATGTGCTGAAA
GCCTGGCTGGGCGTCAACCGGGCCTGTTTTGTCCTGCTCAAGCTGGTGGA
GGAGTGTCCCGCACTGCTGGACGACTGCAAGAAAGCCATCGCGGCGGAGA
GGAGCCTTAGCCAGATACTCGCGGACCGTAAGACGCCCGGAGCCAAGCTA
CTGGCCGCCAAACTGGACATTGGCAAAGCAAGCTTTCTAGACCAT
BO33712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:12:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pen-RA | 2214 | CG1685-PA | 1..2211 | 17..2227 | 11055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:12:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pen-RA | 2367 | CG1685-RA | 93..2303 | 17..2227 | 11055 | 100 | Plus |
| dod-RA | 1021 | CG17051-RA | 730..913 | 2227..2044 | 920 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:12:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21348001..21348705 | 1166..462 | 3525 | 100 | Minus |
| X | 23542271 | X | 21346957..21347432 | 2044..1569 | 2380 | 100 | Minus |
| X | 23542271 | X | 21349306..21349751 | 462..17 | 2230 | 100 | Minus |
| X | 23542271 | X | 21347531..21347933 | 1568..1166 | 2015 | 100 | Minus |
| X | 23542271 | X | 21346567..21346750 | 2227..2044 | 920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:12:14 has no hits.
BO33712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-22 18:21:57 Download gff for
BO33712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pen-RA | 89..2299 | 17..2229 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:03 Download gff for
BO33712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pen-RA | 93..2303 | 17..2229 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:23:15 Download gff for
BO33712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pen-RA | 93..2303 | 17..2229 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:23:15 Download gff for
BO33712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21346564..21346749 | 2045..2229 | 98 | <- | Minus |
| X | 21346957..21347432 | 1569..2044 | 100 | <- | Minus |
| X | 21347531..21347933 | 1166..1568 | 100 | <- | Minus |
| X | 21348002..21348704 | 463..1165 | 100 | <- | Minus |
| X | 21349306..21349751 | 17..462 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:03 Download gff for
BO33712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21217591..21217776 | 2045..2229 | 98 | <- | Minus |
| arm_X | 21217984..21218459 | 1569..2044 | 100 | <- | Minus |
| arm_X | 21218558..21218960 | 1166..1568 | 100 | <- | Minus |
| arm_X | 21219029..21219731 | 463..1165 | 100 | <- | Minus |
| arm_X | 21220333..21220778 | 17..462 | 100 | | Minus |
BO33712.pep Sequence
Translation from 16 to 2245
> BO33712.pep
MVSSEPKGPANVANTASPLKAHESSGKRANGQKFKPGGAGGARKFDKFGG
GAGKSFVKPGAGGAKKFDKSGPGGFKKFDKSGATGDKRLGGNKFRGKPQT
QPQAPAEGEKQDWNKFKKEKKDLKLKRKSAKDTYEISKEANQIHEKLRCR
RTENKDKLVEQIYKVLNVGDTISKVVKAHDTARVIQSMLKYASPALRAEI
SEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGH
SIGSGLLDSMYQSATPNQRIYMRQEFYGDLYRKAKDSNVKTLSDTYKEAT
NMKASILGSVKANLDHVANKQLVDSALVHAVMLEYLRACDEDEEKLEETV
TAFAALVPHMLSTKEGSEAAVICFYKSTPKNRRAIIKNIKEHLLKIANHE
HGHVFLISLLNALDDTKATKKAIYDHLHGDLKALMSSPYGRRVIQWLVAP
GDTTCFHPEFIRTVEEGLAFGKKEKELRRKEILEQIEAPIAQSIAEDAAF
WLSNSHIGLVTGDILNHIQGESYEKAASALAQVVVQPEWRISADAAGPQP
QDKKKPHNDVEAIIAQATKQRRKLLYVESSSDDEDEDEDEDEESDDEGDE
KEQKEAAADDAEPKVKKAKKEPKKPKAKEEEPAAPLVSGIEEAGMHIVLK
KILKNDGKREGTPFSQQLLQNLSSDVLKAWLGVNRACFVLLKLVEECPAL
LDDCKKAIAAERSLSQILADRKTPGAKLLAAKLDIGKASFLDH
BO33712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pen-PA | 737 | CG1685-PA | 1..737 | 1..737 | 3777 | 100 | Plus |
