BO33742.complete Sequence
1573 bp assembled on 2013-01-23
GenBank Submission: KX795401
> BO33742.complete
GAAGTTATCAGTCGACATGAATGAACTGCAGTCGAATAGCAACCAGCCTC
CGCCGCGCAATGAGCCGTATCTGCAGCCGGTGAATGGCATCGTGCAACCG
CCGGTGATTCCGCCACCGAATCGTCCTGGGCGAAGGACAAACATCCTAGA
AGAGCTCAAGTCCGTGCTGAATTGCTTATGGCGCAATCGCTTCTCGTATC
ACTTTCGCCATCCCGTCGATTCTGTGAGCCTGGGTGTGCCCGACTACCAT
GCGGTGGTCAAGCATCCGATGGACTTGAGTACAATTAGGAAGCGACTGCA
CAACAAATACTACTGGCAGGCGAGCGAGGCTCTGGAGGATTTCAAGCTGA
TATTCGATAACTGCTTGTTGTACAATTTGGAGGGCTCACCGGTTTATCAG
GCAGGGAAGCTTCTAATGGAGGCCTTTTACATGCGAATGGAGTCCATTGA
TTTGAGCACGGAGGTGGAACTAAAGCCGAAGTCGGAAAAGCGCAAGAGAA
AGGCTACTGAATCATTGGATCAAGCCTCGACTTCGTTCTCAGCACCTCGA
GCATCTAACAATTATTCTAGACAGTGGCTCTCGAGTAGTTCCTCATGGCT
CTGTCCCCCACCGATGCCTGGCGGGGTGTCGTCATTTAATCCTTCATTCC
GAAATTTCGTGGGTCCCAGCTTGATCCCATCTTTTATGCCCGATTCCTTG
GTGAATCCCATGCAATCTATGCATCCAATGTCATCAATGATGAATCCGAT
ATTCAAGAATAATTGGGAGACAAATGAAGCAATGGATCCACCGCCCTCAG
AGCCAATTTCCTATCGTCCCTTGGATTCCTTGGCAGCACCCTTACCGTCC
CCTCCAATGGAACCCATGACTTTGCCTTGGCCAACCCCAGCACCAGTTGA
ATCTCCAGCTTCATCGCCTCCTCCGGCTCCCAATCCACCCATTATCATCT
GCTACAAGTCTCTCGACCGAATGATTGAAAAAAGCCACTCAGATCATCTT
CTGAAGTCGATGGTAAAGCGAAAGCGCAAGCAGGTTACATGGGCATTTAA
TCAGGCTGACTACTGGCGAAGGTACTCCCAGAATCCGGACTACGACCACG
ATCGCGAAGAGAAACTCGATTGGAAGATACTACAGGAGCGCTTGGACTCC
GATAACTTTGAGAGCTTTGATGGATTCGTGAGCTCTGTACGAAAGATGTT
CCAGAACGCATTGCGTTGCTTTCCGGAAGATGGATTGGTCAAGGTTTCGG
TGAAGAAAACCAATGAGATCTTTGAGAAAAGGCTGCCCAAGTACAGGGAG
TTAATTGCCACGGCCAAGGAAAAGGGGCGTCAACTGGTGGCCAGCAGGGA
ACAAGATTTTCGTGACTCACAAAACCTGCTCATTAAACAAGAAAACGCTA
ATAAGAATTTCAAAGGATGGGTTCCAAAGCCATTTATTATTAAAACGGAG
TCCCTGTTTGTGCAAGAACAGCGAGTGTACAAAATGGAGCCCCAGGATGT
ACAAGAATTTTCACCTGGTACGGAGCCGCTGGATGACCAAACTTATGATA
GCGATGCAAGCTTTCTAGACCAT
BO33742.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:13:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tbrd-1-RA | 1542 | CG13597-PA | 1..1539 | 17..1555 | 7695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:13:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tbrd-1-RA | 1726 | CG13597-RA | 71..1609 | 17..1555 | 7695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:13:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23891714..23893252 | 1555..17 | 7695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:13:33 has no hits.
BO33742.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-23 09:16:07 Download gff for
BO33742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13597-RA | 71..1609 | 17..1557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:17 Download gff for
BO33742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tbrd-1-RA | 71..1609 | 17..1557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:23:47 Download gff for
BO33742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tbrd-1-RA | 71..1609 | 17..1557 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:23:47 Download gff for
BO33742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23891712..23893252 | 17..1557 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:17 Download gff for
BO33742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19717434..19718974 | 17..1557 | 99 | | Minus |
BO33742.pep Sequence
Translation from 16 to 1573
> BO33742.pep
MNELQSNSNQPPPRNEPYLQPVNGIVQPPVIPPPNRPGRRTNILEELKSV
LNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYW
QASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEV
ELKPKSEKRKRKATESLDQASTSFSAPRASNNYSRQWLSSSSSWLCPPPM
PGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQSMHPMSSMMNPIFKNNW
ETNEAMDPPPSEPISYRPLDSLAAPLPSPPMEPMTLPWPTPAPVESPASS
PPPAPNPPIIICYKSLDRMIEKSHSDHLLKSMVKRKRKQVTWAFNQADYW
RRYSQNPDYDHDREEKLDWKILQERLDSDNFESFDGFVSSVRKMFQNALR
CFPEDGLVKVSVKKTNEIFEKRLPKYRELIATAKEKGRQLVASREQDFRD
SQNLLIKQENANKNFKGWVPKPFIIKTESLFVQEQRVYKMEPQDVQEFSP
GTEPLDDQTYDSDASFLDH
BO33742.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:06:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tbrd-1-PA | 513 | CG13597-PA | 1..513 | 1..513 | 2751 | 100 | Plus |
| fs(1)h-PH | 1105 | CG2252-PH | 2..263 | 7..268 | 429 | 37.2 | Plus |
| fs(1)h-PF | 1110 | CG2252-PF | 2..263 | 7..268 | 429 | 37.2 | Plus |
| fs(1)h-PE | 1110 | CG2252-PE | 2..263 | 7..268 | 429 | 37.2 | Plus |
| fs(1)h-PD | 1110 | CG2252-PD | 2..263 | 7..268 | 429 | 37.2 | Plus |
| fs(1)h-PH | 1105 | CG2252-PH | 494..579 | 59..144 | 179 | 39.5 | Plus |
| fs(1)h-PF | 1110 | CG2252-PF | 499..584 | 59..144 | 179 | 39.5 | Plus |
| fs(1)h-PE | 1110 | CG2252-PE | 499..584 | 59..144 | 179 | 39.5 | Plus |
