Clone BO33759 Report

Search the DGRC for BO33759

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:337
Well:59
Vector:pDNR-Dual
Associated Gene/TranscripteIF-2beta-RA
Protein status:BO33759.pep: Imported from assembly
Sequenced Size:970

Clone Sequence Records

BO33759.complete Sequence

970 bp assembled on 2012-12-20

GenBank Submission: KX797839

> BO33759.complete
GAAGTTATCAGTCGACATGGACGCGGAAGACGGTTTTGATCCCACTTTGC
TGAAAAAGAAGAAGAAGAAGAAGACCACGTTCGATCTGGACGCGGCATTG
GGTCTGGAGGATGACACCAAGAAGGAGGATCCCCAGGATGAGGCATCGGC
GGAAGGAGGTGCCGCCGCCGAGGAGGATAATCTAGATCTGGAGAGTTTCG
GCAAGAAGAAGAAAAAGAAGAAGAAGCCCTTCAACATGGACGAAATCGAA
GCGGCCATACCCAGCTTTGGCGGCGATGATGTGGCCGCCAGCGAGGAGCC
CGAGGAGGAGGAGATCAATCTGGACATGGACTTCTCGATGGCCAAAAAGA
AGAAGAAGAGCAAGAAGAAGGAACTGGACGAGCTGTTTGCGGACCAAGCG
GACGACGACAAGAGCGAAGACAAAGAGAACGACGAGGACAACAGCTCAAC
CTGGTTTGGCTCCGACCGCGATTACACATACGACGAGTTGCTGAAGCGGG
TCTTCGAAATCATTCTCGACAAGAATCCGGACATGGCCGCCGGCCGAAAG
CCAAAGTTCGTGATGCGACCGCCGCAGGTGCTGCGCGTGGGAACCAAGAA
GACCTCCTTTGCCAACTTCATGGACATTGCGAAAACGCTGCATCGCCTGC
CCAAGCATCTGCTCGATTTCCTGCTGGCCGAGTTGGGTACCAGTGGCTCC
ATGGACGGCAACCAGCAGCTGATCATCAAGGGCCGTTTCCAGCCCAAACA
GATCGAGAATGTGCTGCGTCGCTACATCAAGGAGTACGTCACCTGTCACA
CCTGCCGCTCCCCGGAAACGATATTGCAGAAGGACACGCGTCTCTTCTTC
CTGCAGTGCGAATCCTGTGGCTCCCGCTGCTCGGTGGCCAGCATTAAGTC
AGGTTTCCAGGCTGTCACCGGCAAACGTGCCGCCATACGAGCAAAAACAA
CCGCAAGCTTTCTAGACCAT

BO33759.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-2beta-RA 939 CG4153-PA 1..936 17..952 4680 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-2beta-RA 1128 CG4153-RA 129..1064 17..952 4680 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12525157..12525678 952..431 2610 100 Minus
3L 28110227 3L 12525986..12526385 431..32 2000 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:03:28 has no hits.

BO33759.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-20 11:59:37 Download gff for BO33759.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-2beta-RA 135..1070 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:24 Download gff for BO33759.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-2beta-RA 135..1070 17..954 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:20:21 Download gff for BO33759.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-2beta-RA 129..1064 17..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:20:21 Download gff for BO33759.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12525155..12525677 432..954 99 <- Minus
3L 12525986..12526385 32..431 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:24 Download gff for BO33759.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12518255..12518777 432..954 99 <- Minus
arm_3L 12519086..12519485 32..431 100 <- Minus

BO33759.pep Sequence

Translation from 16 to 970

> BO33759.pep
MDAEDGFDPTLLKKKKKKKTTFDLDAALGLEDDTKKEDPQDEASAEGGAA
AEEDNLDLESFGKKKKKKKKPFNMDEIEAAIPSFGGDDVAASEEPEEEEI
NLDMDFSMAKKKKKSKKKELDELFADQADDDKSEDKENDEDNSSTWFGSD
RDYTYDELLKRVFEIILDKNPDMAAGRKPKFVMRPPQVLRVGTKKTSFAN
FMDIAKTLHRLPKHLLDFLLAELGTSGSMDGNQQLIIKGRFQPKQIENVL
RRYIKEYVTCHTCRSPETILQKDTRLFFLQCESCGSRCSVASIKSGFQAV
TGKRAAIRAKTTASFLDH

BO33759.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-2beta-PA 312 CG4153-PA 1..312 1..312 1611 100 Plus