Clone BO33805 Report

Search the DGRC for BO33805

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:338
Well:5
Vector:pDNR-Dual
Associated Gene/Transcriptnito-RA
Protein status:BO33805.pep: Imported from assembly
Sequenced Size:2413

Clone Sequence Records

BO33805.complete Sequence

2413 bp assembled on 2013-04-18

GenBank Submission: KX795584

> BO33805.complete
GAAGTTATCAGTCGACATGAGTAGTCATCGAGACGGAGCCGGAGCCGATC
GTATCACAATCAAAATTCACAACATGAAGCGTAGCGCCTCGCGCTCCCCG
GGCCCGGCCTCCAGGAGCAGTTTGTCGCGCAACTCGCGAAGCATGGGTCG
TGGGTACGACAACGGCAGCGGCGTGCCTGGCGATTCGCCGGAGCGCCTGT
CGCCGGAGCGCATGCGACGTCGATTGGACCGCTCGCCGAGTCGTTATGGC
TCCCCGCACCGGGAGCCCTACATGCGTGGTCCACCGCCTGCAGAGCGACC
AGCTGGCTACAAGGTACTTTGCGTCAGTGCCCTGCCGCCAAAGGCTCCGG
ACGATTTTATCGAGGAGACACTGTACCGCGAGTACAAGAAGTTTGGCGAT
TTTAGCGTGCGACTGGCGCACGACTTGGATGAACGGGTTGCTTACGTTTG
CTTCCGAACGCCTGAAGATGCACGCGAGGCGAAGCACCATAAGCCGCGCC
TGATCATCTACGACAAGATGGCCATTGTGGAGCCGGTGTACAAGTCCACA
ACCAGACCGGAATATAGACCACGCGGTCACTCAATGTCCCCACCGGACTA
TGAACGTTACCACTACTCGAGGTCCCCTATGGGACAAGGCGTTCCTTTGG
ATCACCGTCGACCTCCGATTGATCCCTACGATCGGTACGGTCCTCCCCAT
ATGCATCCGCACGCAGTCCATCCACGTGATTACCGCCCATTGCATCATGA
CTATCCTCATCCGCCACGCGGACCACCTTTGCATCGCGGCGGCCATCCGC
ATCACCTCCATGGCCATGCGCCGCCCCATCAGTATGCTCCAATGAGGCCA
TTGGCACCACGCCCACACGCTCCCTATGAAAAGCCTGAGAGCAAGAAGGA
CAAGTTCCCCAATTACTTGCACCATGTGCAGCCCGAGGATGATCCTCTTT
CTACGCGCACACTGTTTGCAGGAAATCTGGAGGTTACCATCGCCGACGAC
GAACTGCGTCGCATCTTTGGCAAATACGGAGTGGTAGATGACATCGACAT
CAAGCGACCGCCGCCGGGTACGGGGAACGCGTTCGCGTTTGTACGTTACC
AAAACCTGGATATGGCTCACCGAGCGAAGATCGAATTGTCTGGACAGTAC
ATTGGCAAGTTTCAGTGCAAGATCGGATACGGGAAAGTGACTCCGGCAAC
TCGTATGTGGATCGGAGGCTTAGGTGCCTGGACTTCTGTCACTCAGCTGG
AGCGAGAGTTTGATCGCTTCGGTGCGATCAAGAAGATTGAATACCAGAAG
GGCGAGCCGTACGCTTATATTCAGTACGAGACAGTGGAGGCAGCCACGGC
GGCGGTAAAGGAGATGCGAGGATTCCCATTGGGTGGACCGGAGCGTCGAC
TCCGCACGGACTTTGCCGAGTTGCCCGGCGCCACACCGGCAGCGCCTTTC
AAGAGCTCAAAGCCGCCATATGATGAAAGTGCGTTGGAGTACAGACGTCC
GGAATACGATCCGTATTACGAAGAGTCCGCCGCCTACGCTCCGCGCGGTG
GCTATTCTCCGTATCCACCTAGGGGTGGCTACCGTGGACGTGGGGGATAT
CGCGGAAGAGGAAGAGGCATGTACCATTATCACAACGACGTGCATAGGCC
GCCGCATCCTGGCTCCTTAGCAGGTTCCTCTTCTTCAGTTCCCCCTCCCG
GCGGAGTGGAGGATGAGTGGCGACGCCCGCCAGGAGAATCGTACGACAGA
GGAGCCCGCTCCAGCTCTCGGGAACCTGGTGTAGAACGCTCTCGTTCTAG
ATCCCCATTGAAGCGGGCTCGCTCTCCCGGATCTGATTCTGACACCTCGA
CTCGTCGGAACGACGCCCTTGCATCAGCCAGTACGGTTCCAGATGTGGCG
CGCAAGTGCAGCACAGTGTGGACCGGAGCGCTAATCCTCAAGAGCTCACT
GTTCCCAGCCAAGTTTCATTTGACGGACGGAGATACGGATATTGTGGAGT
CGCTGATGCGCGATGAGGAGGGCAAGCACAACCTACGTATCACCCAGCGA
CTGCGTCTGGATCCGCCCAAGCTGGACGACGTGCAAAAACGTATTGCATC
CTCATCGTCGCACGCCATTTTCATGGGTCTGGCAGGGTCCACAAACGACA
CCAATTGCGACGATGCCAGCGTGCAGACGCGACCACTAAGAAACTTGGTT
TCCTATCTTAAGCAGAAGGAGGCGGCTGGCGTGATCTCGCTGCTTAACAA
GGAGACGGAGGCAACTGGGGTGCTGTACGCCTTCCCCCCCTGCGACTTTT
CCACAGAGCTGCTAAAGCGCACTTGTCACAGTCTGACGGAGGAGGGCCTG
AAGGAGGATCACCTGGTGATTGTGGTGGTGCGCGGCGGAACGGCCGCAAG
CTTTCTAGACCAT

BO33805.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
nito-RC 2382 CG2910-PC 1..2379 17..2395 11895 100 Plus
nito-RA 2382 CG2910-PA 1..2379 17..2395 11895 100 Plus
nito-RB 2382 CG2910-PB 1..2379 17..2395 11895 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
nito-RC 3084 CG2910-RC 215..2594 16..2395 11900 100 Plus
nito-RA 4001 CG2910-RA 215..2594 16..2395 11900 100 Plus
nito-RB 3115 CG2910-RB 215..2594 16..2395 11900 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:16:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7963450..7965279 566..2395 9150 100 Plus
2R 25286936 2R 7962842..7963393 16..567 2760 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:16:35 has no hits.

BO33805.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 14:58:00 Download gff for BO33805.complete
Subject Subject Range Query Range Percent Splice Strand
nito-RB 193..2571 17..2397 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:11 Download gff for BO33805.complete
Subject Subject Range Query Range Percent Splice Strand
nito-RB 216..2594 17..2397 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:04 Download gff for BO33805.complete
Subject Subject Range Query Range Percent Splice Strand
nito-RB 216..2594 17..2397 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:04 Download gff for BO33805.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7962843..7963393 17..567 100 -> Plus
2R 7963452..7965279 568..2397 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:11 Download gff for BO33805.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3850348..3850898 17..567 100 -> Plus
arm_2R 3850957..3852784 568..2397 99   Plus

BO33805.pep Sequence

Translation from 16 to 2413

> BO33805.pep
MSSHRDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNG
SGVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKV
LCVSALPPKAPDDFIEETLYREYKKFGDFSVRLAHDLDERVAYVCFRTPE
DAREAKHHKPRLIIYDKMAIVEPVYKSTTRPEYRPRGHSMSPPDYERYHY
SRSPMGQGVPLDHRRPPIDPYDRYGPPHMHPHAVHPRDYRPLHHDYPHPP
RGPPLHRGGHPHHLHGHAPPHQYAPMRPLAPRPHAPYEKPESKKDKFPNY
LHHVQPEDDPLSTRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPP
GTGNAFAFVRYQNLDMAHRAKIELSGQYIGKFQCKIGYGKVTPATRMWIG
GLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAAVKEM
RGFPLGGPERRLRTDFAELPGATPAAPFKSSKPPYDESALEYRRPEYDPY
YEESAAYAPRGGYSPYPPRGGYRGRGGYRGRGRGMYHYHNDVHRPPHPGS
LAGSSSSVPPPGGVEDEWRRPPGESYDRGARSSSREPGVERSRSRSPLKR
ARSPGSDSDTSTRRNDALASASTVPDVARKCSTVWTGALILKSSLFPAKF
HLTDGDTDIVESLMRDEEGKHNLRITQRLRLDPPKLDDVQKRIASSSSHA
IFMGLAGSTNDTNCDDASVQTRPLRNLVSYLKQKEAAGVISLLNKETEAT
GVLYAFPPCDFSTELLKRTCHSLTEEGLKEDHLVIVVVRGGTAASFLDH

BO33805.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
nito-PC 793 CG2910-PC 1..793 1..793 4295 100 Plus
nito-PA 793 CG2910-PA 1..793 1..793 4295 100 Plus
nito-PB 793 CG2910-PB 1..793 1..793 4295 100 Plus
spen-PH 5458 CG18497-PH 572..747 286..467 278 36.3 Plus
spen-PC 5476 CG18497-PC 572..747 286..467 278 36.3 Plus
spen-PH 5458 CG18497-PH 5271..5455 588..787 175 26 Plus