BO33805.complete Sequence
2413 bp assembled on 2013-04-18
GenBank Submission: KX795584
> BO33805.complete
GAAGTTATCAGTCGACATGAGTAGTCATCGAGACGGAGCCGGAGCCGATC
GTATCACAATCAAAATTCACAACATGAAGCGTAGCGCCTCGCGCTCCCCG
GGCCCGGCCTCCAGGAGCAGTTTGTCGCGCAACTCGCGAAGCATGGGTCG
TGGGTACGACAACGGCAGCGGCGTGCCTGGCGATTCGCCGGAGCGCCTGT
CGCCGGAGCGCATGCGACGTCGATTGGACCGCTCGCCGAGTCGTTATGGC
TCCCCGCACCGGGAGCCCTACATGCGTGGTCCACCGCCTGCAGAGCGACC
AGCTGGCTACAAGGTACTTTGCGTCAGTGCCCTGCCGCCAAAGGCTCCGG
ACGATTTTATCGAGGAGACACTGTACCGCGAGTACAAGAAGTTTGGCGAT
TTTAGCGTGCGACTGGCGCACGACTTGGATGAACGGGTTGCTTACGTTTG
CTTCCGAACGCCTGAAGATGCACGCGAGGCGAAGCACCATAAGCCGCGCC
TGATCATCTACGACAAGATGGCCATTGTGGAGCCGGTGTACAAGTCCACA
ACCAGACCGGAATATAGACCACGCGGTCACTCAATGTCCCCACCGGACTA
TGAACGTTACCACTACTCGAGGTCCCCTATGGGACAAGGCGTTCCTTTGG
ATCACCGTCGACCTCCGATTGATCCCTACGATCGGTACGGTCCTCCCCAT
ATGCATCCGCACGCAGTCCATCCACGTGATTACCGCCCATTGCATCATGA
CTATCCTCATCCGCCACGCGGACCACCTTTGCATCGCGGCGGCCATCCGC
ATCACCTCCATGGCCATGCGCCGCCCCATCAGTATGCTCCAATGAGGCCA
TTGGCACCACGCCCACACGCTCCCTATGAAAAGCCTGAGAGCAAGAAGGA
CAAGTTCCCCAATTACTTGCACCATGTGCAGCCCGAGGATGATCCTCTTT
CTACGCGCACACTGTTTGCAGGAAATCTGGAGGTTACCATCGCCGACGAC
GAACTGCGTCGCATCTTTGGCAAATACGGAGTGGTAGATGACATCGACAT
CAAGCGACCGCCGCCGGGTACGGGGAACGCGTTCGCGTTTGTACGTTACC
AAAACCTGGATATGGCTCACCGAGCGAAGATCGAATTGTCTGGACAGTAC
ATTGGCAAGTTTCAGTGCAAGATCGGATACGGGAAAGTGACTCCGGCAAC
TCGTATGTGGATCGGAGGCTTAGGTGCCTGGACTTCTGTCACTCAGCTGG
AGCGAGAGTTTGATCGCTTCGGTGCGATCAAGAAGATTGAATACCAGAAG
GGCGAGCCGTACGCTTATATTCAGTACGAGACAGTGGAGGCAGCCACGGC
GGCGGTAAAGGAGATGCGAGGATTCCCATTGGGTGGACCGGAGCGTCGAC
TCCGCACGGACTTTGCCGAGTTGCCCGGCGCCACACCGGCAGCGCCTTTC
AAGAGCTCAAAGCCGCCATATGATGAAAGTGCGTTGGAGTACAGACGTCC
GGAATACGATCCGTATTACGAAGAGTCCGCCGCCTACGCTCCGCGCGGTG
GCTATTCTCCGTATCCACCTAGGGGTGGCTACCGTGGACGTGGGGGATAT
CGCGGAAGAGGAAGAGGCATGTACCATTATCACAACGACGTGCATAGGCC
GCCGCATCCTGGCTCCTTAGCAGGTTCCTCTTCTTCAGTTCCCCCTCCCG
GCGGAGTGGAGGATGAGTGGCGACGCCCGCCAGGAGAATCGTACGACAGA
GGAGCCCGCTCCAGCTCTCGGGAACCTGGTGTAGAACGCTCTCGTTCTAG
ATCCCCATTGAAGCGGGCTCGCTCTCCCGGATCTGATTCTGACACCTCGA
CTCGTCGGAACGACGCCCTTGCATCAGCCAGTACGGTTCCAGATGTGGCG
CGCAAGTGCAGCACAGTGTGGACCGGAGCGCTAATCCTCAAGAGCTCACT
GTTCCCAGCCAAGTTTCATTTGACGGACGGAGATACGGATATTGTGGAGT
CGCTGATGCGCGATGAGGAGGGCAAGCACAACCTACGTATCACCCAGCGA
CTGCGTCTGGATCCGCCCAAGCTGGACGACGTGCAAAAACGTATTGCATC
CTCATCGTCGCACGCCATTTTCATGGGTCTGGCAGGGTCCACAAACGACA
CCAATTGCGACGATGCCAGCGTGCAGACGCGACCACTAAGAAACTTGGTT
TCCTATCTTAAGCAGAAGGAGGCGGCTGGCGTGATCTCGCTGCTTAACAA
GGAGACGGAGGCAACTGGGGTGCTGTACGCCTTCCCCCCCTGCGACTTTT
CCACAGAGCTGCTAAAGCGCACTTGTCACAGTCTGACGGAGGAGGGCCTG
AAGGAGGATCACCTGGTGATTGTGGTGGTGCGCGGCGGAACGGCCGCAAG
CTTTCTAGACCAT
BO33805.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:16:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nito-RC | 2382 | CG2910-PC | 1..2379 | 17..2395 | 11895 | 100 | Plus |
nito-RA | 2382 | CG2910-PA | 1..2379 | 17..2395 | 11895 | 100 | Plus |
nito-RB | 2382 | CG2910-PB | 1..2379 | 17..2395 | 11895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:16:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nito-RC | 3084 | CG2910-RC | 215..2594 | 16..2395 | 11900 | 100 | Plus |
nito-RA | 4001 | CG2910-RA | 215..2594 | 16..2395 | 11900 | 100 | Plus |
nito-RB | 3115 | CG2910-RB | 215..2594 | 16..2395 | 11900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:16:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7963450..7965279 | 566..2395 | 9150 | 100 | Plus |
2R | 25286936 | 2R | 7962842..7963393 | 16..567 | 2760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:16:35 has no hits.
BO33805.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 14:58:00 Download gff for
BO33805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nito-RB | 193..2571 | 17..2397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:11 Download gff for
BO33805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nito-RB | 216..2594 | 17..2397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:04 Download gff for
BO33805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nito-RB | 216..2594 | 17..2397 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:04 Download gff for
BO33805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7962843..7963393 | 17..567 | 100 | -> | Plus |
2R | 7963452..7965279 | 568..2397 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:11 Download gff for
BO33805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3850348..3850898 | 17..567 | 100 | -> | Plus |
arm_2R | 3850957..3852784 | 568..2397 | 99 | | Plus |
BO33805.pep Sequence
Translation from 16 to 2413
> BO33805.pep
MSSHRDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNG
SGVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKV
LCVSALPPKAPDDFIEETLYREYKKFGDFSVRLAHDLDERVAYVCFRTPE
DAREAKHHKPRLIIYDKMAIVEPVYKSTTRPEYRPRGHSMSPPDYERYHY
SRSPMGQGVPLDHRRPPIDPYDRYGPPHMHPHAVHPRDYRPLHHDYPHPP
RGPPLHRGGHPHHLHGHAPPHQYAPMRPLAPRPHAPYEKPESKKDKFPNY
LHHVQPEDDPLSTRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPP
GTGNAFAFVRYQNLDMAHRAKIELSGQYIGKFQCKIGYGKVTPATRMWIG
GLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAAVKEM
RGFPLGGPERRLRTDFAELPGATPAAPFKSSKPPYDESALEYRRPEYDPY
YEESAAYAPRGGYSPYPPRGGYRGRGGYRGRGRGMYHYHNDVHRPPHPGS
LAGSSSSVPPPGGVEDEWRRPPGESYDRGARSSSREPGVERSRSRSPLKR
ARSPGSDSDTSTRRNDALASASTVPDVARKCSTVWTGALILKSSLFPAKF
HLTDGDTDIVESLMRDEEGKHNLRITQRLRLDPPKLDDVQKRIASSSSHA
IFMGLAGSTNDTNCDDASVQTRPLRNLVSYLKQKEAAGVISLLNKETEAT
GVLYAFPPCDFSTELLKRTCHSLTEEGLKEDHLVIVVVRGGTAASFLDH
BO33805.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nito-PC | 793 | CG2910-PC | 1..793 | 1..793 | 4295 | 100 | Plus |
nito-PA | 793 | CG2910-PA | 1..793 | 1..793 | 4295 | 100 | Plus |
nito-PB | 793 | CG2910-PB | 1..793 | 1..793 | 4295 | 100 | Plus |
spen-PH | 5458 | CG18497-PH | 572..747 | 286..467 | 278 | 36.3 | Plus |
spen-PC | 5476 | CG18497-PC | 572..747 | 286..467 | 278 | 36.3 | Plus |
spen-PH | 5458 | CG18497-PH | 5271..5455 | 588..787 | 175 | 26 | Plus |