Clone BO33847 Report

Search the DGRC for BO33847

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:338
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG9107-RA
Protein status:BO33847.pep: Imported from assembly
Sequenced Size:832

Clone Sequence Records

BO33847.complete Sequence

832 bp assembled on 2012-12-20

GenBank Submission: KX793789

> BO33847.complete
GAAGTTATCAGTCGACATGGTTGAACTGGAGGGCTATGTAGTGGTGCCGC
TGCGCACGACGCCGAAGGCGCAACATTGCCACAGTATCTACATGCGGGAG
CACTTCATCCGTCTGATGGATCCCAACAAACCGAAGGGACGCACACTCTT
TCTGCTCAACGTGCCGCCCTACGTGACAGAGGACAGCCTGCGCACGGTCT
TCGGCCGGGCGGGGAGCATCGAGGCCGTGGAGTTCGCCGCCAAACCGGGC
AAGGAGGAGACCATCAAGTGGTACGAGGGCACCGGCGAACCCTTCTCCAA
CACTCGTCCGCCCTTCGTCTTCAAGGTGGCCTACATAGTGTTCGAGAAGA
ACAGCAGCATCGGCAAGGCGCTGGCACTAAAGAGCATTGACCTGTTCAAC
AGCAGCGGCGAGTGCATCGTCAAGACCGGCATGGAGCTGTGGCACGAGGA
GTACGACTGCAATTACCTGCTGGATGCGCAAAAGACGAAGCTACAGATCA
GCAAGTACATGGCCGGCTACGACAAGAGGGAGCGAGCGGCGGCACAGGCG
GCCAAGACCGGAGAGGCCGACGCCGACGGATGGGTCACCGTCGGCAAGGA
GGGTCGCAATGCTGGCTTCGAGCAGAAGGCGTCCGTAATTGGACGCCTGG
AGGAGAAGGTGGCCAAGGGCAATAAGACCAAGGAGCTAAAGAACTTCTAC
ACCTTCCAAATACGCGAGAGCAAGATGCAGAATATCGTCGAGATGCGCAA
GAAGTTCGAGGAGGAAAAGCGAAAGATCGGGCTGCTCAAGCAGTCGCGCC
GCTTCAAACCATTTGCAAGCTTTCTAGACCAT

BO33847.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:02:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG9107-RB 801 CG9107-PB 1..798 17..814 3990 100 Plus
CG9107-RA 801 CG9107-PA 1..798 17..814 3990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:02:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG9107-RB 922 CG9107-RB 76..873 17..814 3990 100 Plus
CG9107-RA 1534 CG9107-RA 76..873 17..814 3990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:02:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6023612..6024386 814..40 3875 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:02:33 has no hits.

BO33847.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-12-20 11:59:29 Download gff for BO33847.complete
Subject Subject Range Query Range Percent Splice Strand
CG9107-RB 72..869 17..816 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:00 Download gff for BO33847.complete
Subject Subject Range Query Range Percent Splice Strand
CG9107-RA 76..873 17..816 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:58 Download gff for BO33847.complete
Subject Subject Range Query Range Percent Splice Strand
CG9107-RA 76..873 17..816 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:58 Download gff for BO33847.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6023610..6024384 42..816 99 <- Minus
2L 6024440..6024464 17..41 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:00 Download gff for BO33847.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6023610..6024384 42..816 99 <- Minus
arm_2L 6024440..6024464 17..41 100   Minus

BO33847.pep Sequence

Translation from 16 to 832

> BO33847.pep
MVELEGYVVVPLRTTPKAQHCHSIYMREHFIRLMDPNKPKGRTLFLLNVP
PYVTEDSLRTVFGRAGSIEAVEFAAKPGKEETIKWYEGTGEPFSNTRPPF
VFKVAYIVFEKNSSIGKALALKSIDLFNSSGECIVKTGMELWHEEYDCNY
LLDAQKTKLQISKYMAGYDKRERAAAQAAKTGEADADGWVTVGKEGRNAG
FEQKASVIGRLEEKVAKGNKTKELKNFYTFQIRESKMQNIVEMRKKFEEE
KRKIGLLKQSRRFKPFASFLDH

BO33847.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG9107-PB 266 CG9107-PB 1..266 1..266 1385 100 Plus
CG9107-PA 266 CG9107-PA 1..266 1..266 1385 100 Plus