BO33901.complete Sequence
355 bp assembled on 2013-04-19
GenBank Submission: KX796624
> BO33901.complete
GAAGTTATCAGTCGACATGAACTATCAACATTACAGGGCCACAACGCTGG
GCAGAACGCTCCAGGACACTTTGGATGAGATGATGGAGAGGGGCGATATA
ACCAAGAAGATTGCTAATTTGGTTTTACTAAGATATGACAAGAGCATTTC
AACAGCTCTCAAGGATCATGGCACGAGCAATATGTCCTTTACGGCCGAAA
GACTGGAAACCTTTAGATGCTGCGACAATGTGTGGACTCTGATCCTAAAG
GACGCGGAGTTCCGCGAGGATCAGCATTCCTTGAAGGTCGATGTGGTCAA
AATTGTGGCCTGTCTTGGAACTGACAATGGAAATGAAGCAAGCTTTCTAG
ACCAT
BO33901.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TfIIA-S-2-RA | 324 | CG11639-PA | 1..321 | 17..337 | 1605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TfIIA-S-2-RA | 462 | CG11639-RA | 90..419 | 8..337 | 1620 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1011144..1011401 | 337..80 | 1260 | 99.2 | Minus |
X | 23542271 | X | 1011474..1011554 | 88..8 | 375 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:20:22 has no hits.
BO33901.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:31:06 Download gff for
BO33901.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TfIIA-S-2-RA | 99..419 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:59 Download gff for
BO33901.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TfIIA-S-2-RA | 99..419 | 17..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:27 Download gff for
BO33901.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TfIIA-S-2-RA | 99..419 | 17..339 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:27 Download gff for
BO33901.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1011142..1011392 | 89..339 | 99 | <- | Minus |
X | 1011474..1011545 | 17..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:59 Download gff for
BO33901.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 905175..905425 | 89..339 | 99 | <- | Minus |
arm_X | 905507..905578 | 17..88 | 100 | | Minus |
BO33901.pep Sequence
Translation from 16 to 355
> BO33901.pep
MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKD
HGTSNMSFTAERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACL
GTDNGNEASFLDH
BO33901.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TfIIA-S-2-PA | 107 | CG11639-PA | 1..107 | 1..107 | 558 | 100 | Plus |
TfIIA-S-PA | 106 | CG5163-PA | 1..101 | 1..101 | 278 | 55.4 | Plus |