BO33904.complete Sequence
781 bp assembled on 2013-04-22
GenBank Submission: KX796765
> BO33904.complete
GAAGTTATCAGTCGACATGCAGTTACTGTGCTACTTCGTCATCCTTTTCG
TTGGAATCGCACCGTGGTCATCCTTGGCCAACGATGATGGATGCAACGAA
GTGGTCTGCGGATCGGTGGTATCCAAGTGCCTCATCACCCAGAGCTGCCA
GTGCAAGTTAAATGACTGCCACTGCTGCAAGGACTGTCTAAATTGCCTTG
GCGAACTGTACATCGAGTGCTGTGGCTGCCTCGACATGTGTCCCAAGCAC
AAGGATGTCCTGCCCTCGCTGACGCCGCGCTCGGAGATTGGAGACATTGA
AGGAGTGCCCGAGCTGTTCGACACCCTAACCGCCGAGGATGACGAGGGAT
GGTCCACCATAAGGTTCTCCATGCGAGCCGGCTTCAAGCAGCGCGTTCAG
GGCGGCGCGAGTGGTGATGCCGGAAACGGAAATGGAAATGGAAATGCCGG
GTCTGCAGGTGTCACCCTATGCACCGTGATCTATGTGAACTCGTGCATTC
GGGCAAACAAGTGCCGGCAGCAGTGCGAGAGCATGGGAGCCAGTAGCTAT
CGATGGTTCCACGACGGATGCTGCGAGTGCGTCGGCGAGAATTGCCTCAA
TTATGGAATCAACGAGAGTCGCTGCCGCGGTTGTCCGGAGGATCAGGACC
AACTGCTTACCGCCGATACCGTTCCGGCGGAGGCTGAACAGGATCTGGAG
CGATTCTTTGGCAACGAGGAGATCGAGGACGAGTGGGGCTATGGCGAGGA
GGATGAATTTTCCGCAAGCTTTCTAGACCAT
BO33904.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:29:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsg-RA | 750 | CG1502-PA | 1..747 | 17..763 | 3735 | 100 | Plus |
| cv-RC | 774 | CG12410-PC | 79..189 | 92..202 | 210 | 79.3 | Plus |
| cv-RB | 774 | CG12410-PB | 79..189 | 92..202 | 210 | 79.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:29:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsg-RA | 887 | CG1502-RA | 37..783 | 17..763 | 3735 | 100 | Plus |
| cv-RC | 1742 | CG12410-RC | 846..956 | 92..202 | 210 | 79.3 | Plus |
| cv-RB | 1308 | CG12410-RB | 412..522 | 92..202 | 210 | 79.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:29:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11988166..11988912 | 763..17 | 3735 | 100 | Minus |
| X | 23542271 | X | 5690847..5690957 | 92..202 | 210 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:29:11 has no hits.
BO33904.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 16:06:24 Download gff for
BO33904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsg-RA | 2..748 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:13 Download gff for
BO33904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsg-RA | 37..783 | 17..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:50 Download gff for
BO33904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsg-RA | 37..783 | 17..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:50 Download gff for
BO33904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11988164..11988912 | 17..765 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:13 Download gff for
BO33904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11882197..11882945 | 17..765 | 99 | | Minus |
BO33904.pep Sequence
Translation from 16 to 781
> BO33904.pep
MQLLCYFVILFVGIAPWSSLANDDGCNEVVCGSVVSKCLITQSCQCKLND
CHCCKDCLNCLGELYIECCGCLDMCPKHKDVLPSLTPRSEIGDIEGVPEL
FDTLTAEDDEGWSTIRFSMRAGFKQRVQGGASGDAGNGNGNGNAGSAGVT
LCTVIYVNSCIRANKCRQQCESMGASSYRWFHDGCCECVGENCLNYGINE
SRCRGCPEDQDQLLTADTVPAEAEQDLERFFGNEEIEDEWGYGEEDEFSA
SFLDH
BO33904.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsg-PA | 249 | CG1502-PA | 1..249 | 1..249 | 1397 | 100 | Plus |
| cv-PC | 257 | CG12410-PC | 25..242 | 24..230 | 540 | 43.2 | Plus |
| cv-PB | 257 | CG12410-PB | 25..242 | 24..230 | 540 | 43.2 | Plus |
| cv-PA | 257 | CG12410-PA | 25..242 | 24..230 | 540 | 43.2 | Plus |
| srw-PB | 136 | CG11582-PB | 21..128 | 82..208 | 286 | 42.7 | Plus |
