Clone BO33906 Report

Search the DGRC for BO33906

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:6
Vector:pDNR-Dual
Associated Gene/Transcriptmei-W68-RA
Protein status:BO33906.pep: Imported from assembly
Sequenced Size:1027

Clone Sequence Records

BO33906.complete Sequence

1027 bp assembled on 2013-04-22

GenBank Submission: KX794487

> BO33906.complete
GAAGTTATCAGTCGACATGGATGAATTTTCGGAGAATATAGAAAGAATTG
CCCTCGAGTTGCTGAGCAACTTGGTTCATGGCAATGCCACTCTTAGTGTT
CCCCGAAATTCATCCGGAAACGTGATCTCGGAATATCGACGAGTCAGCTA
TAATAATCGCGGAAGTCGCCATAGCTTTTGCGTGCTGATTTACATGCTCT
CCCGGGTGCACCGATTGCAAGTCCGCGGAGGAAGTTTCACCGTCCGTGGA
CTATACTATGACAATCCTCTGCTAGTCCGGTCGCAGTCCAGGATTGCCGA
AGCCAGGCTAGATGTCTGTCGTATGCTGAGGACATCCCCCCTAAGCTTGG
GCATACTGGCCGCCTCCAAGGGCCTGGTGGCAGGCGACTTAAGGCTGCTG
ATGACCAACGGAGACGTTCTGGACAGCAGCTTGTATGGTGGACCTCTGAC
ATTGCCCACGGATCCCGAGAAGATAGATCGAATCGAAACGCTGGCGGAAT
TTGTGCTAATCGTTGAAAAGGAGTCGGTTTTTGAGAGTCTCTTATCCAGA
AATGTATTTGGTACTTTTGAACGACGCTTCATCCTTATAACTGGAAAAGG
ATACCCCGATTGCTGTACCCGGAGGATTGTCCATCGGCTCACCGAGGAGA
ACCAACTGGCGGCCTACATTCTCGTTGACGCCGATCCATTTGGCGTCGAG
ATAATGCTAGTCTATCGCCATGGCTCGAAGTCCATGAGTTTTTCCAGCCA
AGGACTAACCACACCTGCGCTGCGTTGGATTGGTCTACACCCCTCGGAGA
TTCCCGCACTCGGCACTGGAGCGGTTGCCCTGGTTGCCGGCGACAACAAG
AAAATCAATGACCTCCTCGCCCGCCACGATTTGGAGCCGGGAGTGCGGCA
GGAACTGCGCATGCTGCAGGACGTTCAGCTGAAGGCCGAAATCGAGAGTG
TCATCGACTTCCTGACCGACGACTATATACCAAATAAAATCAATCGGAAC
TTGTTTTTGGCAAGCTTTCTAGACCAT

BO33906.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
mei-W68-RA 996 CG7753-PA 1..993 17..1009 4965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:29:40
Subject Length Description Subject Range Query Range Score Percent Strand
mei-W68-RA 2300 CG7753-RA 887..1879 17..1009 4965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19458473..19459102 380..1009 3150 100 Plus
2R 25286936 2R 19458052..19458419 17..384 1840 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:29:31 has no hits.

BO33906.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 16:08:08 Download gff for BO33906.complete
Subject Subject Range Query Range Percent Splice Strand
mei-W68-RA 862..1854 17..1011 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:15 Download gff for BO33906.complete
Subject Subject Range Query Range Percent Splice Strand
mei-W68-RA 887..1879 17..1011 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:51 Download gff for BO33906.complete
Subject Subject Range Query Range Percent Splice Strand
mei-W68-RA 887..1879 17..1011 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:51 Download gff for BO33906.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19458052..19458418 17..383 100 -> Plus
2R 19458477..19459102 384..1011 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:15 Download gff for BO33906.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15345557..15345923 17..383 100 -> Plus
arm_2R 15345982..15346607 384..1011 99   Plus

BO33906.pep Sequence

Translation from 16 to 1027

> BO33906.pep
MDEFSENIERIALELLSNLVHGNATLSVPRNSSGNVISEYRRVSYNNRGS
RHSFCVLIYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDV
CRMLRTSPLSLGILAASKGLVAGDLRLLMTNGDVLDSSLYGGPLTLPTDP
EKIDRIETLAEFVLIVEKESVFESLLSRNVFGTFERRFILITGKGYPDCC
TRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQGLTTP
ALRWIGLHPSEIPALGTGAVALVAGDNKKINDLLARHDLEPGVRQELRML
QDVQLKAEIESVIDFLTDDYIPNKINRNLFLASFLDH

BO33906.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:12
Subject Length Description Subject Range Query Range Score Percent Strand
mei-W68-PA 331 CG7753-PA 1..331 1..331 1674 100 Plus