BO33906.complete Sequence
1027 bp assembled on 2013-04-22
GenBank Submission: KX794487
> BO33906.complete
GAAGTTATCAGTCGACATGGATGAATTTTCGGAGAATATAGAAAGAATTG
CCCTCGAGTTGCTGAGCAACTTGGTTCATGGCAATGCCACTCTTAGTGTT
CCCCGAAATTCATCCGGAAACGTGATCTCGGAATATCGACGAGTCAGCTA
TAATAATCGCGGAAGTCGCCATAGCTTTTGCGTGCTGATTTACATGCTCT
CCCGGGTGCACCGATTGCAAGTCCGCGGAGGAAGTTTCACCGTCCGTGGA
CTATACTATGACAATCCTCTGCTAGTCCGGTCGCAGTCCAGGATTGCCGA
AGCCAGGCTAGATGTCTGTCGTATGCTGAGGACATCCCCCCTAAGCTTGG
GCATACTGGCCGCCTCCAAGGGCCTGGTGGCAGGCGACTTAAGGCTGCTG
ATGACCAACGGAGACGTTCTGGACAGCAGCTTGTATGGTGGACCTCTGAC
ATTGCCCACGGATCCCGAGAAGATAGATCGAATCGAAACGCTGGCGGAAT
TTGTGCTAATCGTTGAAAAGGAGTCGGTTTTTGAGAGTCTCTTATCCAGA
AATGTATTTGGTACTTTTGAACGACGCTTCATCCTTATAACTGGAAAAGG
ATACCCCGATTGCTGTACCCGGAGGATTGTCCATCGGCTCACCGAGGAGA
ACCAACTGGCGGCCTACATTCTCGTTGACGCCGATCCATTTGGCGTCGAG
ATAATGCTAGTCTATCGCCATGGCTCGAAGTCCATGAGTTTTTCCAGCCA
AGGACTAACCACACCTGCGCTGCGTTGGATTGGTCTACACCCCTCGGAGA
TTCCCGCACTCGGCACTGGAGCGGTTGCCCTGGTTGCCGGCGACAACAAG
AAAATCAATGACCTCCTCGCCCGCCACGATTTGGAGCCGGGAGTGCGGCA
GGAACTGCGCATGCTGCAGGACGTTCAGCTGAAGGCCGAAATCGAGAGTG
TCATCGACTTCCTGACCGACGACTATATACCAAATAAAATCAATCGGAAC
TTGTTTTTGGCAAGCTTTCTAGACCAT
BO33906.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:29:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mei-W68-RA | 996 | CG7753-PA | 1..993 | 17..1009 | 4965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:29:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mei-W68-RA | 2300 | CG7753-RA | 887..1879 | 17..1009 | 4965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:29:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19458473..19459102 | 380..1009 | 3150 | 100 | Plus |
2R | 25286936 | 2R | 19458052..19458419 | 17..384 | 1840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:29:31 has no hits.
BO33906.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 16:08:08 Download gff for
BO33906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mei-W68-RA | 862..1854 | 17..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:15 Download gff for
BO33906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mei-W68-RA | 887..1879 | 17..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:51 Download gff for
BO33906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mei-W68-RA | 887..1879 | 17..1011 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:51 Download gff for
BO33906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19458052..19458418 | 17..383 | 100 | -> | Plus |
2R | 19458477..19459102 | 384..1011 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:15 Download gff for
BO33906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15345557..15345923 | 17..383 | 100 | -> | Plus |
arm_2R | 15345982..15346607 | 384..1011 | 99 | | Plus |
BO33906.pep Sequence
Translation from 16 to 1027
> BO33906.pep
MDEFSENIERIALELLSNLVHGNATLSVPRNSSGNVISEYRRVSYNNRGS
RHSFCVLIYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDV
CRMLRTSPLSLGILAASKGLVAGDLRLLMTNGDVLDSSLYGGPLTLPTDP
EKIDRIETLAEFVLIVEKESVFESLLSRNVFGTFERRFILITGKGYPDCC
TRRIVHRLTEENQLAAYILVDADPFGVEIMLVYRHGSKSMSFSSQGLTTP
ALRWIGLHPSEIPALGTGAVALVAGDNKKINDLLARHDLEPGVRQELRML
QDVQLKAEIESVIDFLTDDYIPNKINRNLFLASFLDH
BO33906.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mei-W68-PA | 331 | CG7753-PA | 1..331 | 1..331 | 1674 | 100 | Plus |