BO33907.complete Sequence
1210 bp assembled on 2013-05-23
GenBank Submission: KX793857
> BO33907.complete
GAAGTTATCAGTCGACATGGAAAATAAAGAAAAGAAGCAAAAGCCCCTTA
AACGCCATGCCCAAGTTCCACTCATCATTCCCAAGAACTCAGTGATCAGC
ACCTATGCCGTCGGTCGCCTCTGTTCGGAACCTGCTTTGGTCAGGATTGA
GGTTAAAGATCTGATTGGAAGTGGATCCTTTGGCCGGGTTTACCAGGCTC
ATGTGAATGAGTCCGAGGAAATAGTGGCCGTTAAGCAAACCCTTTACAAT
CCGAAGTTGAGCCAGGGCGAAGCAGAAATTATGGGTCAGCTAAAGGACCA
CAACAACATTGTCCGGCTCATCATGCACTCGTCCGTGAGTTTGGGCTTTC
CGTCAGTGGACTACGTTTTGCTGGTTATGGAGTACATGCCTATGACTTTG
CTGGACTATATCAACTATCACCTAACGGTGCTACAGCCCGCAGAGCGCCT
AATCAATGTCCGCATACTCTCGTATCAGATGTTCAGAGGATTGGGATATC
TTCATCTATTGGGCATTTCCCACCGGGACGTCAAGCCCGAGAATCTGCTG
ATAGACAACCAGAAGATGGTGCTTAAGCTAAGTGATTTTGGAAGCGCCAA
ACTCCTGGTGCCCCAGGAGCCCAGTATAAGCTACATTTGCTCCAGGCTTT
ATCGTGCTCCGGAGCTTTTTGCCGGGTACGAACTTTATTCGTGTGCCGTG
GACATCTGGAGTGCTGGTTGCGTCCTGGCGGAGCTGCTCAAGGGATATCC
GCTCTTCTCCAGCCACAAACATGACCGAAAGCAGCTGCGACTCATCGTTA
ATATGCTGGGCACCGATGGCTTGGAACGAGCTCCTGAAATACTCTCAAAG
TGCGGAAATTCACTTCACCCACGGACCACTCGTCCCAGTTGGAATTATCT
CCTGAATACGGCTGTTCCGCAGGATCTGTGCGGTTTGTTGAACTCGTGTT
TCATCTATGAAGCCGCCGCTAGAATCTCACCTATGATGGCATGTAGTCAT
GGTTCCTATGATGAATTGCGCATCATGGACGCCATGGCGTTGCCCATGCC
CAATGGCAATCCGCTCCCCCCTCTGTTCGACTTCAACAGCCTGGAGATGG
GTACAGATCCAAAACTTTGGGTCAACCTATTACCGATCCATTTGTCTTCA
ATGGAGGACAAGTATTCGGTCGTAGAAGCCTTTGAAGCAGTCGCAAGCTT
TCTAGACCAT
BO33907.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:44:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pk34A-RA | 1179 | CG5182-PA | 1..1176 | 17..1192 | 5850 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:44:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pk34A-RA | 1303 | CG5182-RA | 70..1245 | 17..1192 | 5850 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:44:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13158943..13160115 | 20..1192 | 5835 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:44:09 has no hits.
BO33907.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-23 10:50:18 Download gff for
BO33907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pk34A-RA | 70..1245 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:31 Download gff for
BO33907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pk34A-RA | 70..1245 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:53 Download gff for
BO33907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pk34A-RA | 70..1245 | 17..1194 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:53 Download gff for
BO33907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13158941..13160115 | 17..1194 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:31 Download gff for
BO33907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13158941..13160115 | 17..1194 | 99 | | Plus |
BO33907.pep Sequence
Translation from 16 to 1210
> BO33907.pep
MENKEKKQKPLKRHAQVPLIIPKNSVISTYAVGRLCSEPALVRIEVKDLI
GSGSFGRVYQAHVNESEEIVAVKQTLYNPKLSQGEAEIMGQLKDHNNIVR
LIMHSSVSLGFPSVDYVLLVMEYMPMTLLDYINYHLTVLQPAERLINVRI
LSYQMFRGLGYLHLLGISHRDVKPENLLIDNQKMVLKLSDFGSAKLLVPQ
EPSISYICSRLYRAPELFAGYELYSCAVDIWSAGCVLAELLKGYPLFSSH
KHDRKQLRLIVNMLGTDGLERAPEILSKCGNSLHPRTTRPSWNYLLNTAV
PQDLCGLLNSCFIYEAAARISPMMACSHGSYDELRIMDAMALPMPNGNPL
PPLFDFNSLEMGTDPKLWVNLLPIHLSSMEDKYSVVEAFEAVASFLDH
BO33907.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pk34A-PA | 392 | CG5182-PA | 1..392 | 1..392 | 2037 | 100 | Plus |
| sgg-PG | 496 | CG2621-PG | 41..365 | 49..378 | 591 | 40.8 | Plus |
| sgg-PC | 514 | CG2621-PC | 59..383 | 49..378 | 591 | 40.8 | Plus |
| sgg-PF | 514 | CG2621-PF | 59..383 | 49..378 | 591 | 40.8 | Plus |
| sgg-PE | 514 | CG2621-PE | 59..383 | 49..378 | 591 | 40.8 | Plus |
