BO33909.complete Sequence
628 bp assembled on 2013-04-19
GenBank Submission: KX793927
> BO33909.complete
GAAGTTATCAGTCGACATGTGCTCCCAACTGTTCGCATTTCTGCTCCTCC
TTTTGACCGCTTTTGTGACGGGTAGAAGTACTCCACCGGCGTTGGATGAA
GACTGTGAACTGAATTCTGTAGATACAATGCATGATTTCTGCTGCGACCT
GCACGACGAGAGTCCCCAGTTTAGCGACTGCCAGATGGAGTGGCACGAAA
AGATTCCATACGAGACGGATGAAGAGGAGCAGACGTACATGTTTTGCACC
GCAGAGTGCAGTTTCAACAGTACGAACTTCTTGGGCAGGGACCGCCGTTC
ACTGAATCTCAATGAGGTAAAGGAGCACTTGGAAAGCGACCTGGTCAACG
ATGCGGACATTAAGCTTCTCTATGACACCTATGTCAAGTGCGACAAGCAT
GCGCTCTCACTGATGCCGCACAAAGGTGTGAAGCAGCTATCCAAACGTCT
TTCGCGTCTTGGCTGTCATCCGTATCCCGGACTGGTCCTCGAGTGCGTGG
CCAACGAGATGATCCTGCACTGTCCCACCAAGCGCTTCCGTCAAACAGCC
CAGTGCGAAGAGACACGCAATCATTTGAAGCAATGTATGCAGTATCTAAA
GTACAAGTCCGCAAGCTTTCTAGACCAT
BO33909.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp46a-RA | 597 | CG12905-PA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp46a-RA | 597 | CG12905-RA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10311175..10311384 | 610..401 | 1050 | 100 | Minus |
2R | 25286936 | 2R | 10311442..10311598 | 401..245 | 785 | 100 | Minus |
2R | 25286936 | 2R | 10311650..10311764 | 244..130 | 575 | 100 | Minus |
2R | 25286936 | 2R | 10311910..10312023 | 130..17 | 570 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 13:20:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 3290..3332 | 256..214 | 107 | 72.1 | Minus |
BO33909.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:31:12 Download gff for
BO33909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp46a-RA | 1..594 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:02 Download gff for
BO33909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp46a-RA | 1..594 | 17..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:30 Download gff for
BO33909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp46a-RA | 1..594 | 17..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:30 Download gff for
BO33909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10311173..10311383 | 402..612 | 99 | <- | Minus |
2R | 10311442..10311598 | 245..401 | 100 | <- | Minus |
2R | 10311650..10311763 | 131..244 | 100 | <- | Minus |
2R | 10311910..10312023 | 17..130 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:02 Download gff for
BO33909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6198678..6198888 | 402..612 | 99 | <- | Minus |
arm_2R | 6198947..6199103 | 245..401 | 100 | <- | Minus |
arm_2R | 6199155..6199268 | 131..244 | 100 | <- | Minus |
arm_2R | 6199415..6199528 | 17..130 | 100 | | Minus |
BO33909.pep Sequence
Translation from 16 to 628
> BO33909.pep
MCSQLFAFLLLLLTAFVTGRSTPPALDEDCELNSVDTMHDFCCDLHDESP
QFSDCQMEWHEKIPYETDEEEQTYMFCTAECSFNSTNFLGRDRRSLNLNE
VKEHLESDLVNDADIKLLYDTYVKCDKHALSLMPHKGVKQLSKRLSRLGC
HPYPGLVLECVANEMILHCPTKRFRQTAQCEETRNHLKQCMQYLKYKSAS
FLDH
BO33909.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp46a-PA | 198 | CG12905-PA | 1..198 | 1..198 | 1083 | 100 | Plus |