BO33910.complete Sequence
572 bp assembled on 2013-04-19
> BO33910.complete
GAAGTTATCAGTCGACATGCTGCGCCACCTGCTCCGCCACGAGAACAACA
AGGTCTTCGTCCTGATCCTGCTCTACTGCGTCCTGGTCAGCATTCTGAAA
CTCTGCACGGCACAGCCGGATAGCTCTGTGGCCGCCACGGATAATGATAT
TACGCATCTTGGCGACGATTGTCAGGTGACGCCCGTCATCCATGTGCTCC
AGTATCCTGGATGTGTGCCCAAGCCGATTCCCTCGTTCGCCTGCGTGGGT
CGCTGTGCCAGTTATATCCAGGTTTCGGGCAGTAAGATCTGGCAAATGGA
GCGTTCCTGCATGTGCTGCCAGGAGTCTGGTGAGCGGGAGGCAGCCGTCT
CGCTATTCTGTCCCAAAGTGAAGCCCGGCGAGCGTAAATTCAAGAAGGTC
CTGACCAAGGCGCCATTGGAGTGCATGTGTCGGCCATGCACTTCCATTGA
GGAGTCTGGCATCATACCACAGGAAATTGCCGGCTATTCGGACGAGGGTC
CACTCAACAATCACTTCCGGCGCATTGCTCTGCAAGCAAGCTTTCTAGAC
CATTCGTGTGGCGCGCAAACGG
BO33910.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Burs-RA | 522 | CG13419-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Burs-RA | 640 | CG13419-RA | 30..552 | 13..535 | 2600 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21769926..21770191 | 270..535 | 1330 | 100 | Plus |
| 3R | 32079331 | 3R | 21769547..21769685 | 13..151 | 665 | 98.6 | Plus |
| 3R | 32079331 | 3R | 21769744..21769871 | 146..273 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:20:18 has no hits.
BO33910.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:29:10 Download gff for
BO33910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| burs-RA | 1..522 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:57 Download gff for
BO33910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| burs-RA | 34..558 | 17..543 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:25 Download gff for
BO33910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Burs-RA | 34..558 | 17..543 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:25 Download gff for
BO33910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21769551..21769680 | 17..146 | 100 | -> | Plus |
| 3R | 21769745..21769869 | 147..271 | 100 | -> | Plus |
| 3R | 21769928..21770197 | 272..543 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:57 Download gff for
BO33910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17595273..17595402 | 17..146 | 100 | -> | Plus |
| arm_3R | 17595467..17595591 | 147..271 | 100 | -> | Plus |
| arm_3R | 17595650..17595919 | 272..543 | 98 | | Plus |
BO33910.pep Sequence
Translation from 16 to 571
> BO33910.pep
MLRHLLRHENNKVFVLILLYCVLVSILKLCTAQPDSSVAATDNDITHLGD
DCQVTPVIHVLQYPGCVPKPIPSFACVGRCASYIQVSGSKIWQMERSCMC
CQESGEREAAVSLFCPKVKPGERKFKKVLTKAPLECMCRPCTSIEESGII
PQEIAGYSDEGPLNNHFRRIALQASFLDHSCGAQT
BO33910.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Burs-PA | 173 | CG13419-PA | 1..173 | 1..173 | 930 | 100 | Plus |
