BO33912.complete Sequence
631 bp assembled on 2013-05-22
GenBank Submission: KX797325
> BO33912.complete
GAAGTTATCAGTCGACATGAAGTGCACCATTTTATTGAGTTTTTTCAGCC
TGATTTGGTTTGCTGGTGGAATTAAAATTGATTGCGAGAATACGGAGGCC
ATTAACGAGGACCACATCCACTATTGCTGCAAGCATCCCGATGGACACAA
TGATCTAATCGAAGGATGTGCCAGGGAGACCAATTTTACGCTGCCCAATC
AAAACGAGGAGGCACTGGTGGACATCACGGCGGACCGAGCCATCCGAGGC
ACTTGTTTTGGCAAATGCGTCTTTAGCAAACTGAACCTGATGAAGGACAA
CAACCTGGACATGGATGCCGTGAGAAGTTTGTTCACTGAAAGGTTTCCCG
ACGATCCGGAATATGCCAAGGAAATGATCAACGCCTTTGATCATTGTCAC
GGCAAAAGCGAAGAGAATACCTCCATGTTCCTGTCGAAGCCCCTCTTCAA
GCAAATGTCCAAGCAATTCTGCGATCCGAAGTCTAGTGTCGTCCTGGCCT
GTGTCATCCGCCAGTTCTTCCACAACTGCCCGGCGGATCGCTGGTCGAAG
ACCAAGGAGTGCGAGGATACCCTGGCCTTCAGCAAGAAGTGCCAGGACTC
GCTGGCTACTTTGGCAAGCTTTCTAGACCAT
BO33912.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp58c-RA | 600 | CG13524-PA | 1..597 | 17..613 | 2985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:43:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp58c-RA | 691 | CG13524-RA | 19..615 | 17..613 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:43:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22706213..22706570 | 408..51 | 1760 | 99.4 | Minus |
| 2R | 25286936 | 2R | 22705948..22706157 | 613..404 | 1035 | 99.5 | Minus |
| 2R | 25286936 | 2R | 22706619..22706660 | 58..17 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:43:50 has no hits.
BO33912.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-22 15:04:20 Download gff for
BO33912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp58c-RA | 1..597 | 17..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:13:22 Download gff for
BO33912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp58c-RA | 19..615 | 17..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:33:44 Download gff for
BO33912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp58c-RA | 19..615 | 17..615 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:33:44 Download gff for
BO33912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22705945..22706153 | 408..615 | 99 | <- | Minus |
| 2R | 22706214..22706562 | 59..407 | 100 | <- | Minus |
| 2R | 22706619..22706660 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:13:22 Download gff for
BO33912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18593450..18593658 | 408..615 | 99 | <- | Minus |
| arm_2R | 18593719..18594067 | 59..407 | 100 | <- | Minus |
| arm_2R | 18594124..18594165 | 17..58 | 100 | | Minus |
BO33912.pep Sequence
Translation from 16 to 631
> BO33912.pep
MKCTILLSFFSLIWFAGGIKIDCENTEAINEDHIHYCCKHPDGHNDLIEG
CARETNFTLPNQNEEALVDITADRAIRGTCFGKCVFSKLNLMKDNNLDMD
AVRSLFTERFPDDPEYAKEMINAFDHCHGKSEENTSMFLSKPLFKQMSKQ
FCDPKSSVVLACVIRQFFHNCPADRWSKTKECEDTLAFSKKCQDSLATLA
SFLDH
BO33912.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp58c-PA | 199 | CG13524-PA | 1..199 | 1..199 | 1089 | 100 | Plus |
| Obp58b-PA | 203 | CG13518-PA | 22..203 | 19..199 | 584 | 54.4 | Plus |
| Obp47b-PA | 199 | CG13208-PA | 22..195 | 17..192 | 168 | 24.2 | Plus |
