Clone BO33914 Report

Search the DGRC for BO33914

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:14
Vector:pDNR-Dual
Associated Gene/Transcriptpburs-RA
Protein status:BO33914.pep: Imported from assembly
Sequenced Size:457

Clone Sequence Records

BO33914.complete Sequence

457 bp assembled on 2013-04-19

GenBank Submission: KX799984

> BO33914.complete
GAAGTTATCAGTCGACATGCATGTCCAGGAACTGCTCTTTGTGGCCGCGA
TCCTAGTGCCCCAATGCCTGAGGGCATTGCGATATAGCCAAGGCACTGGC
GACGAGAACTGCGAGACTCTCAAGTCGGAGATCCACTTGATCAAGGAGGA
GTTCGACGAGCTGGGCCGGATGCAGAGGACCTGCAATGCCGACGTCATCG
TCAACAAATGCGAAGGATTGTGCAACAGTCAGGTGCAACCATCGGTGATA
ACGCCCACGGGGTTTCTGAAAGAGTGCTACTGCTGCCGCGAAAGCTTCCT
CAAGGAAAAGGTCATCACTCTAACCCATTGCTATGACCCGGACGGCACCC
GTTTGACCTCTCCGGAAATGGGAAGCATGGATATACGTCTTCGGGAGCCC
ACCGAGTGCAAGTGCTTCAAATGTGGCGATTTCACACGTGCAAGCTTTCT
AGACCAT

BO33914.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
Pburs-RA 426 CG15284-PA 1..423 17..439 2115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:43
Subject Length Description Subject Range Query Range Score Percent Strand
Pburs-RA 545 CG15284-RA 13..436 16..439 2120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14417063..14417319 272..16 1285 100 Minus
2L 23513712 2L 14416838..14417005 439..272 840 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:20:41 has no hits.

BO33914.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:34:47 Download gff for BO33914.complete
Subject Subject Range Query Range Percent Splice Strand
pburs-RA 1..423 17..441 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:09 Download gff for BO33914.complete
Subject Subject Range Query Range Percent Splice Strand
pburs-RA 14..436 17..441 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:34 Download gff for BO33914.complete
Subject Subject Range Query Range Percent Splice Strand
Pburs-RA 14..436 17..441 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:34 Download gff for BO33914.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14416836..14417005 272..441 98 <- Minus
2L 14417064..14417318 17..271 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:09 Download gff for BO33914.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14416836..14417005 272..441 98 <- Minus
arm_2L 14417064..14417318 17..271 100   Minus

BO33914.pep Sequence

Translation from 16 to 457

> BO33914.pep
MHVQELLFVAAILVPQCLRALRYSQGTGDENCETLKSEIHLIKEEFDELG
RMQRTCNADVIVNKCEGLCNSQVQPSVITPTGFLKECYCCRESFLKEKVI
TLTHCYDPDGTRLTSPEMGSMDIRLREPTECKCFKCGDFTRASFLDH

BO33914.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
Pburs-PA 141 CG15284-PA 1..141 1..141 765 100 Plus