BO33917.complete Sequence
526 bp assembled on 2013-04-19
GenBank Submission: KX796210
> BO33917.complete
GAAGTTATCAGTCGACATGGACATATCTGGTGGGAATACGTCGCGCCAGC
CCCAAAAGAAGTCCAACCAAAACATCCAGGTGTATGTGCGCGTCAGACCC
CTTAATTCTCGGGAACGTTGCATCCGCTCGGCCGAAGTCGTGGATGTGGT
CGGACCACGGGAAGTGGTCACCCGCCACACGCTGGACTCCAAGCTCACCA
AGAAGTTCACCTTTGACCGCAGTTTTGGCCCCGAGTCCAAGCAGTGCGAT
GTCTACTCCGTCGTGGTGTCTCCGCTGATCGAGGAGGTCCTCAATGGCTA
TAACTGCACGGTGTTTGCTTATGGCCAGACGGGCAACAATCTGCGTCCGC
CCAAGTCACTTTACATCGAGGTGCGCTGCATGGAGGACTATGGGAAGTTC
GAGCTGGACGACGGCGAGGTGATCCACCTGAAGAAGAACAGCCAGCACTA
TCTGCCCCGAGCTCAGGTGGAGTCTCTCGTGAGGCAGGGCATTCTTCACC
ACATAGCCGCAAGCTTTCTAGACCAT
BO33917.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32318-RA | 495 | CG32318-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
Klp61F-RA | 3201 | CG9191-PA | 1..319 | 17..335 | 1595 | 100 | Plus |
Psf1-RA | 609 | CG9187-PA | 432..606 | 334..508 | 875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:18:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32318-RA | 785 | CG32318-RA | 291..782 | 17..508 | 2460 | 100 | Plus |
Klp61F-RA | 3871 | CG9191-RA | 271..589 | 17..335 | 1595 | 100 | Plus |
Psf1-RA | 692 | CG9187-RA | 435..609 | 334..508 | 875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1246076..1246489 | 508..95 | 2070 | 100 | Minus |
3L | 28110227 | 3L | 1245256..1245496 | 335..95 | 1205 | 100 | Minus |
3L | 28110227 | 3L | 1247069..1247243 | 508..334 | 875 | 100 | Minus |
3L | 28110227 | 3L | 1245561..1245640 | 96..17 | 400 | 100 | Minus |
3L | 28110227 | 3L | 1246554..1246633 | 96..17 | 400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:18:53 has no hits.
BO33917.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:14:04 Download gff for
BO33917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32318-RA | 257..748 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:21 Download gff for
BO33917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32318-RA | 291..782 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:58 Download gff for
BO33917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32318-RA | 291..782 | 17..510 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:58 Download gff for
BO33917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1246074..1246487 | 97..510 | 99 | <- | Minus |
3L | 1246554..1246633 | 17..96 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:21 Download gff for
BO33917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1246074..1246487 | 97..510 | 99 | <- | Minus |
arm_3L | 1246554..1246633 | 17..96 | 100 | | Minus |
BO33917.pep Sequence
Translation from 16 to 526
> BO33917.pep
MDISGGNTSRQPQKKSNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREV
VTRHTLDSKLTKKFTFDRSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVF
AYGQTGNNLRPPKSLYIEVRCMEDYGKFELDDGEVIHLKKNSQHYLPRAQ
VESLVRQGILHHIAASFLDH
BO33917.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32318-PA | 164 | CG32318-PA | 1..164 | 1..164 | 857 | 100 | Plus |
Klp61F-PA | 1066 | CG9191-PA | 1..106 | 1..106 | 549 | 100 | Plus |
Psf1-PA | 202 | CG9187-PA | 145..202 | 107..164 | 308 | 100 | Plus |
Klp68D-PB | 784 | CG7293-PB | 5..109 | 9..106 | 181 | 41.9 | Plus |
Klp68D-PA | 784 | CG7293-PA | 5..109 | 9..106 | 181 | 41.9 | Plus |