Clone BO33917 Report

Search the DGRC for BO33917

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG32318-RA
Protein status:BO33917.pep: Imported from assembly
Sequenced Size:526

Clone Sequence Records

BO33917.complete Sequence

526 bp assembled on 2013-04-19

GenBank Submission: KX796210

> BO33917.complete
GAAGTTATCAGTCGACATGGACATATCTGGTGGGAATACGTCGCGCCAGC
CCCAAAAGAAGTCCAACCAAAACATCCAGGTGTATGTGCGCGTCAGACCC
CTTAATTCTCGGGAACGTTGCATCCGCTCGGCCGAAGTCGTGGATGTGGT
CGGACCACGGGAAGTGGTCACCCGCCACACGCTGGACTCCAAGCTCACCA
AGAAGTTCACCTTTGACCGCAGTTTTGGCCCCGAGTCCAAGCAGTGCGAT
GTCTACTCCGTCGTGGTGTCTCCGCTGATCGAGGAGGTCCTCAATGGCTA
TAACTGCACGGTGTTTGCTTATGGCCAGACGGGCAACAATCTGCGTCCGC
CCAAGTCACTTTACATCGAGGTGCGCTGCATGGAGGACTATGGGAAGTTC
GAGCTGGACGACGGCGAGGTGATCCACCTGAAGAAGAACAGCCAGCACTA
TCTGCCCCGAGCTCAGGTGGAGTCTCTCGTGAGGCAGGGCATTCTTCACC
ACATAGCCGCAAGCTTTCTAGACCAT

BO33917.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG32318-RA 495 CG32318-PA 1..492 17..508 2460 100 Plus
Klp61F-RA 3201 CG9191-PA 1..319 17..335 1595 100 Plus
Psf1-RA 609 CG9187-PA 432..606 334..508 875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG32318-RA 785 CG32318-RA 291..782 17..508 2460 100 Plus
Klp61F-RA 3871 CG9191-RA 271..589 17..335 1595 100 Plus
Psf1-RA 692 CG9187-RA 435..609 334..508 875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1246076..1246489 508..95 2070 100 Minus
3L 28110227 3L 1245256..1245496 335..95 1205 100 Minus
3L 28110227 3L 1247069..1247243 508..334 875 100 Minus
3L 28110227 3L 1245561..1245640 96..17 400 100 Minus
3L 28110227 3L 1246554..1246633 96..17 400 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:18:53 has no hits.

BO33917.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:14:04 Download gff for BO33917.complete
Subject Subject Range Query Range Percent Splice Strand
CG32318-RA 257..748 17..510 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:21 Download gff for BO33917.complete
Subject Subject Range Query Range Percent Splice Strand
CG32318-RA 291..782 17..510 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:25:58 Download gff for BO33917.complete
Subject Subject Range Query Range Percent Splice Strand
CG32318-RA 291..782 17..510 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:25:58 Download gff for BO33917.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1246074..1246487 97..510 99 <- Minus
3L 1246554..1246633 17..96 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:21 Download gff for BO33917.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1246074..1246487 97..510 99 <- Minus
arm_3L 1246554..1246633 17..96 100   Minus

BO33917.pep Sequence

Translation from 16 to 526

> BO33917.pep
MDISGGNTSRQPQKKSNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREV
VTRHTLDSKLTKKFTFDRSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVF
AYGQTGNNLRPPKSLYIEVRCMEDYGKFELDDGEVIHLKKNSQHYLPRAQ
VESLVRQGILHHIAASFLDH

BO33917.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG32318-PA 164 CG32318-PA 1..164 1..164 857 100 Plus
Klp61F-PA 1066 CG9191-PA 1..106 1..106 549 100 Plus
Psf1-PA 202 CG9187-PA 145..202 107..164 308 100 Plus
Klp68D-PB 784 CG7293-PB 5..109 9..106 181 41.9 Plus
Klp68D-PA 784 CG7293-PA 5..109 9..106 181 41.9 Plus