BO33919.complete Sequence
1048 bp assembled on 2013-04-22
GenBank Submission: KX794612
> BO33919.complete
GAAGTTATCAGTCGACATGACTCCTAACCTCAAACTTGGAGTGCTTCTCG
GATGCGTTCTCTTGTTGGCTACCGTAGCTCTTTCGGCGAGTGTCGGTGAA
TACGAGGAGCTGTGTCGCCTTTTCAAGAACGGGACCAAGGTTCGCAAGCC
CGGCACCTGCGACCAGTACATTCAGTGCTACGATGGCAACGGCACCGTCC
TGACCTGCCCCTCCAACCAGTCCTTCAATCCCAGCAAGGGTAGTTGCGTG
GACACGTTGGCCAACAGCAACAAGTACTGCGGCAATCGCTGCGAGGGATT
GGATGGCGAATGGGTGGCCGATCCGACCGAGTGCCACAAGTACTTCTACT
GCATGAACGGCGTACCGCTGGCGGGGATGTGTCCCGTAGGCCAGCACTTC
GATGAGCGCTCTCAGTCCTGCCTGTACGGCGTGGACTCCATGTGCGTGGA
TGTGAACAACATTTGCGAGCTGGTGGCGGAAAATACGAAGTTCCGGAATG
AGAAGGACTGCGCCTACTACTATGAGTGTGACAAGACCGGTAACCATGCG
TCCAAGAGCTGCACTGTCACCTCCAAGAAGCGCGAGTATTTCGATGTGGA
GAGCGGCAATTGCGTGGAAGCCAATAAGGTGGAGTGCACCGCCCATTCGA
AGGAGAACGTCTGCACCAGCAGCACAACAATGACATTCAAATCCGACCAA
GCCACCTGCCGTGGATACTTCGTATGCAAGGCCCTCTATCCCGTCGCCGA
CCTGGATCCACTGTGGACGCAGTGCCCCGAGGGCTACTTCTTCGACGAGG
ATCGGCAGCTCTGCGCCAATCCCACCACAGTGGTGTGCACCCACAACAGA
TGCGACGGACGCGGCACGATGCTGGTGACCAGCAGCAGCAATAACTGTCA
CAACTACATCCGGTGTGTGGACAACAAGGAGGTGACGGAGGAAACCTGCC
ACTGGGATCACTTCTTCGACGAGACAGTGGAAGCGTGCTCCTCCAAGATC
ATCTACGATAAGTGTTGCGATGGCCGGGACGCAAGCTTTCTAGACCAT
BO33919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17147-RB | 1014 | CG17147-PB | 7..1011 | 26..1030 | 5025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:29:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17147-RB | 1136 | CG17147-RB | 98..1102 | 26..1030 | 5025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:29:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20224287..20225290 | 27..1030 | 5020 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:29:48 has no hits.
BO33919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 16:41:00 Download gff for
BO33919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17147-RA | 1..1014 | 17..1032 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:17 Download gff for
BO33919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17147-RB | 92..1102 | 17..1032 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:53 Download gff for
BO33919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17147-RB | 92..1102 | 17..1032 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:53 Download gff for
BO33919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20224276..20225290 | 17..1032 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:17 Download gff for
BO33919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20217376..20218390 | 17..1032 | 99 | | Plus |
BO33919.pep Sequence
Translation from 16 to 1048
> BO33919.pep
MTPNLKLGVLLGCVLLLATVALSASVGEYEELCRLFKNGTKVRKPGTCDQ
YIQCYDGNGTVLTCPSNQSFNPSKGSCVDTLANSNKYCGNRCEGLDGEWV
ADPTECHKYFYCMNGVPLAGMCPVGQHFDERSQSCLYGVDSMCVDVNNIC
ELVAENTKFRNEKDCAYYYECDKTGNHASKSCTVTSKKREYFDVESGNCV
EANKVECTAHSKENVCTSSTTMTFKSDQATCRGYFVCKALYPVADLDPLW
TQCPEGYFFDEDRQLCANPTTVVCTHNRCDGRGTMLVTSSSNNCHNYIRC
VDNKEVTEETCHWDHFFDETVEACSSKIIYDKCCDGRDASFLDH
BO33919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17147-PB | 337 | CG17147-PB | 3..337 | 4..338 | 1885 | 100 | Plus |
| CG17145-PB | 334 | CG17145-PB | 3..332 | 6..333 | 556 | 35.9 | Plus |
| CG17145-PA | 334 | CG17145-PA | 3..332 | 6..333 | 556 | 35.9 | Plus |
| CG5883-PA | 339 | CG5883-PA | 13..337 | 15..333 | 509 | 34.6 | Plus |
| CG6996-PC | 364 | CG6996-PC | 28..337 | 32..340 | 342 | 28.7 | Plus |
