Clone BO33920 Report

Search the DGRC for BO33920

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptCG34281-RA
Protein status:BO33920.pep: Imported from assembly
Sequenced Size:370

Clone Sequence Records

BO33920.complete Sequence

370 bp assembled on 2013-04-19

> BO33920.complete
GAAGTTATCAGTCGACATGAAGTACCTTTCATTGTCTTTCCTATTGTGCT
GCCTGGTGGCCGGAGTGTTGAGTGCCCCCCAGTTTGGATATGGATTCGCA
CCATATGGAGGATACGGAGGATACGGAGGATATGGAGGAAGCTATGCCTC
CGCCTCTGCCAGCAGCAGTGCGGGAGGATATCAAGGATTCGGATACCCAG
GATACGGGGGATATGGAGGATACGGAGGATTTGGTGGAGGATACGGTGGA
GGCTATGGGCAGCAATACAACCAGTTTAGCAACTACAACAACTACGGATC
TTCTGGCTACTACGGCGGTTACCCATTCGGCAGAGCAAGCTTTCTAGACC
ATTCGTGGGGCGCGAAAGGG

BO33920.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG34281-RA 321 CG34281-PA 1..318 17..334 1590 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:19:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG34281-RA 448 CG34281-RA 14..332 16..334 1595 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17612975..17613288 21..334 1570 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:18:58 has no hits.

BO33920.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:14:07 Download gff for BO33920.complete
Subject Subject Range Query Range Percent Splice Strand
CG34281-RA 1..321 17..337 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:23 Download gff for BO33920.complete
Subject Subject Range Query Range Percent Splice Strand
CG34281-RA 1..321 17..337 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:00 Download gff for BO33920.complete
Subject Subject Range Query Range Percent Splice Strand
CG34281-RA 15..338 17..342 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:00 Download gff for BO33920.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17612969..17613294 17..342 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:23 Download gff for BO33920.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13438691..13439016 17..342 97   Plus

BO33920.pep Sequence

Translation from 16 to 370

> BO33920.pep
MKYLSLSFLLCCLVAGVLSAPQFGYGFAPYGGYGGYGGYGGSYASASASS
SAGGYQGFGYPGYGGYGGYGGFGGGYGGGYGQQYNQFSNYNNYGSSGYYG
GYPFGRASFLDHSWGAKG

BO33920.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG34281-PA 106 CG34281-PA 1..106 1..106 604 100 Plus
CG8157-PB 113 CG8157-PB 1..102 4..112 171 41.2 Plus
CG8157-PA 113 CG8157-PA 1..102 4..112 171 41.2 Plus
Edg91-PB 151 CG7539-PB 41..148 24..109 162 42.2 Plus
Edg91-PA 159 CG7539-PA 49..156 24..109 162 42.2 Plus
Edg91-PB 151 CG7539-PB 28..97 37..112 147 45.5 Plus
Edg91-PB 151 CG7539-PB 28..143 31..109 141 37.3 Plus