BO33920.complete Sequence
370 bp assembled on 2013-04-19
> BO33920.complete
GAAGTTATCAGTCGACATGAAGTACCTTTCATTGTCTTTCCTATTGTGCT
GCCTGGTGGCCGGAGTGTTGAGTGCCCCCCAGTTTGGATATGGATTCGCA
CCATATGGAGGATACGGAGGATACGGAGGATATGGAGGAAGCTATGCCTC
CGCCTCTGCCAGCAGCAGTGCGGGAGGATATCAAGGATTCGGATACCCAG
GATACGGGGGATATGGAGGATACGGAGGATTTGGTGGAGGATACGGTGGA
GGCTATGGGCAGCAATACAACCAGTTTAGCAACTACAACAACTACGGATC
TTCTGGCTACTACGGCGGTTACCCATTCGGCAGAGCAAGCTTTCTAGACC
ATTCGTGGGGCGCGAAAGGG
BO33920.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:18:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34281-RA | 321 | CG34281-PA | 1..318 | 17..334 | 1590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:19:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34281-RA | 448 | CG34281-RA | 14..332 | 16..334 | 1595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:18:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17612975..17613288 | 21..334 | 1570 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:18:58 has no hits.
BO33920.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:14:07 Download gff for
BO33920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..321 | 17..337 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:23 Download gff for
BO33920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 1..321 | 17..337 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:00 Download gff for
BO33920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34281-RA | 15..338 | 17..342 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:00 Download gff for
BO33920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17612969..17613294 | 17..342 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:23 Download gff for
BO33920.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13438691..13439016 | 17..342 | 97 | | Plus |
BO33920.pep Sequence
Translation from 16 to 370
> BO33920.pep
MKYLSLSFLLCCLVAGVLSAPQFGYGFAPYGGYGGYGGYGGSYASASASS
SAGGYQGFGYPGYGGYGGYGGFGGGYGGGYGQQYNQFSNYNNYGSSGYYG
GYPFGRASFLDHSWGAKG
BO33920.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34281-PA | 106 | CG34281-PA | 1..106 | 1..106 | 604 | 100 | Plus |
CG8157-PB | 113 | CG8157-PB | 1..102 | 4..112 | 171 | 41.2 | Plus |
CG8157-PA | 113 | CG8157-PA | 1..102 | 4..112 | 171 | 41.2 | Plus |
Edg91-PB | 151 | CG7539-PB | 41..148 | 24..109 | 162 | 42.2 | Plus |
Edg91-PA | 159 | CG7539-PA | 49..156 | 24..109 | 162 | 42.2 | Plus |
Edg91-PB | 151 | CG7539-PB | 28..97 | 37..112 | 147 | 45.5 | Plus |
Edg91-PB | 151 | CG7539-PB | 28..143 | 31..109 | 141 | 37.3 | Plus |