BO33921.complete Sequence
658 bp assembled on 2013-04-19
GenBank Submission: KX798885
> BO33921.complete
GAAGTTATCAGTCGACATGGGCAACCGCATTGCATCCAGTAGAGGCGCCG
ATGGAGCTGGCGAGGGAGCCGCCGGCGAGGGTAACTCCAGGTTCAATACC
CGCCGCCGATATCAGCAGCACAAGAGGGAATACTGTCTGCAGAACGAGTA
CCGATCGAAGACCCTGCCCGCCCGCCATCCGCACCACAGTGATCCCCACC
AGAGCCACCAGAAGTGCAGCGCCCAGGAGCGACTGGGCTCGAGCAGTTGC
TTGGGAGCTGGCCAGAATGCATCCAACAACGCAACGCCGCACAATGGAGA
GACGTCGAGGGTGCTCTTTCTGCTCTACTTGATTCACCGCACCTGGAACG
TGGTCATGGACACGATGGACTCACGCACCAAGAGTCGTTCGGCTAGAGGG
AATTCCCCTCAAAAAGAGGGGCCCGTGGATATTGAACTCCAGCCGCGGGT
TCTGGATGAGGAATGCTCCATTGGCATCACCGACTTGGACGCCTCATCGT
TCTGCTCCCAGTACTCGTGCTGCAGCTGCAGCTACTGTGATGTGGAAACC
ACTGGGACCCAGACCAATGTCTACAGCTCAATAGGCGACGACTTTTCCCT
GGACTCCATGTTCGAGGCGGGAAAGTCGATGGTTGACAGGGCAAGCTTTC
TAGACCAT
BO33921.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:19:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mwh-RB | 3207 | CG43772-PB | 1..623 | 17..639 | 3115 | 100 | Plus |
| mwh-RC | 3210 | CG43772-PC | 1..626 | 17..639 | 3050 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mwh-RB | 4063 | CG43772-RB | 568..1190 | 17..639 | 3115 | 100 | Plus |
| mwh-RC | 4066 | CG43772-RC | 568..1193 | 17..639 | 3050 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:19:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1206065..1206432 | 17..384 | 1840 | 100 | Plus |
| 3L | 28110227 | 3L | 1206529..1206786 | 383..640 | 1290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:19:02 has no hits.
BO33921.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:16:31 Download gff for
BO33921.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34022-RA | 1..624 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:26 Download gff for
BO33921.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mwh-RB | 568..1191 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:02 Download gff for
BO33921.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mwh-RB | 568..1191 | 17..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:02 Download gff for
BO33921.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1206065..1206432 | 17..384 | 100 | -> | Plus |
| 3L | 1206531..1206786 | 385..642 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:26 Download gff for
BO33921.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1206065..1206432 | 17..384 | 100 | -> | Plus |
| arm_3L | 1206531..1206786 | 385..642 | 99 | | Plus |
BO33921.pep Sequence
Translation from 16 to 658
> BO33921.pep
MGNRIASSRGADGAGEGAAGEGNSRFNTRRRYQQHKREYCLQNEYRSKTL
PARHPHHSDPHQSHQKCSAQERLGSSSCLGAGQNASNNATPHNGETSRVL
FLLYLIHRTWNVVMDTMDSRTKSRSARGNSPQKEGPVDIELQPRVLDEEC
SIGITDLDASSFCSQYSCCSCSYCDVETTGTQTNVYSSIGDDFSLDSMFE
AGKSMVDRASFLDH
BO33921.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mwh-PB | 1068 | CG43772-PB | 1..210 | 1..210 | 1109 | 99 | Plus |
| mwh-PC | 1069 | CG43772-PC | 1..211 | 1..210 | 1097 | 98.6 | Plus |
