Clone BO33922 Report

Search the DGRC for BO33922

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG13202-RA
Protein status:BO33922.pep: Imported from assembly
Sequenced Size:277

Clone Sequence Records

BO33922.complete Sequence

277 bp assembled on 2013-04-19

GenBank Submission: KX798472

> BO33922.complete
GAAGTTATCAGTCGACATGGATAACTGGAAGATAACCGCGGAGGAGCTTA
TCCGTCTGCGGGAGAGCTGCTTGCAGTGCATCCGTGATGGAGAACTCTAT
GAACTGCGCAACGATGCCAAACTTAGGGCTGTTTATAGCACTCAGAACTA
CGAAGAATTCAAGAACATAGTGGATGCGGCTCATCTTCGTCCAGTGACCA
AGGGCGACAAGGCGAATTTTAAGACGAAGAATCGACTATGGAACTCGGCG
GCCCGGGATGCAAGCTTTCTAGACCAT

BO33922.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG13202-RA 246 CG13202-PA 1..243 17..259 1215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG13202-RA 426 CG13202-RA 125..371 13..259 1235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11356326..11356476 163..13 755 100 Minus
2R 25286936 2R 11356169..11356269 259..159 490 99 Minus
Blast to na_te.dros performed on 2014-11-28 13:20:33 has no hits.

BO33922.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:32:00 Download gff for BO33922.complete
Subject Subject Range Query Range Percent Splice Strand
CG13202-RA 22..264 17..261 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:04 Download gff for BO33922.complete
Subject Subject Range Query Range Percent Splice Strand
CG13202-RA 129..371 17..261 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:31 Download gff for BO33922.complete
Subject Subject Range Query Range Percent Splice Strand
CG13202-RA 129..371 17..261 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:31 Download gff for BO33922.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11356167..11356265 163..261 97 <- Minus
2R 11356327..11356472 17..162 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:04 Download gff for BO33922.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7243672..7243770 163..261 97 <- Minus
arm_2R 7243832..7243977 17..162 100   Minus

BO33922.pep Sequence

Translation from 16 to 277

> BO33922.pep
MDNWKITAEELIRLRESCLQCIRDGELYELRNDAKLRAVYSTQNYEEFKN
IVDAAHLRPVTKGDKANFKTKNRLWNSAARDASFLDH

BO33922.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13202-PA 81 CG13202-PA 1..81 1..81 427 100 Plus