BO33923.complete Sequence
412 bp assembled on 2013-04-19
GenBank Submission: KX797608
> BO33923.complete
GAAGTTATCAGTCGACATGAACCAGTTAACCTTTGTATGCTGCCTTTTGT
TGTGGTCCGGGTCTCAGGCTGCGTTCCAGGACTTTGTGATTGGACCTGAA
TCCTATGAAGGTGGTAACGATGTCGTCCCGTTTGGTCAAGAATTATCGGA
TGAGGTGGATGAGGATATAATGGTGTCATTCCAGGATGTACAGCATGATG
GAATAGTGGATACCAATCTACTGATGAAAGCTATAATGCAGCATGCCAAA
CGTTTGGGCATGAGCCTGGATGAACTTGCTAGCTTAAATGTGCAGTCAGA
AGATGAGGAATCTATGAACCAACTTGGGTGCTCAGCTGAGCAAGACGTCT
TCGGATACCCAGAAAAGCCCACTTGGCGGGACGTACTCTTTAACGCAAGC
TTTCTAGACCAT
BO33923.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34185-RA | 381 | CG34185-PA | 1..378 | 17..394 | 1890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34185-RA | 450 | CG34185-RA | 63..440 | 17..394 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14374014..14374191 | 278..101 | 890 | 100 | Minus |
2R | 25286936 | 2R | 14373839..14373955 | 394..278 | 585 | 100 | Minus |
2R | 25286936 | 2R | 14374250..14374333 | 100..17 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:20:37 has no hits.
BO33923.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:33:03 Download gff for
BO33923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34185-RA | 1..378 | 17..396 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:07 Download gff for
BO33923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34185-RA | 63..440 | 17..396 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:32 Download gff for
BO33923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34185-RA | 63..440 | 17..396 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:32 Download gff for
BO33923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14373836..14373954 | 279..396 | 98 | <- | Minus |
2R | 14374014..14374191 | 101..278 | 100 | <- | Minus |
2R | 14374250..14374333 | 17..100 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:07 Download gff for
BO33923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10261341..10261459 | 279..396 | 98 | <- | Minus |
arm_2R | 10261519..10261696 | 101..278 | 100 | <- | Minus |
arm_2R | 10261755..10261838 | 17..100 | 100 | | Minus |
BO33923.pep Sequence
Translation from 16 to 412
> BO33923.pep
MNQLTFVCCLLLWSGSQAAFQDFVIGPESYEGGNDVVPFGQELSDEVDED
IMVSFQDVQHDGIVDTNLLMKAIMQHAKRLGMSLDELASLNVQSEDEESM
NQLGCSAEQDVFGYPEKPTWRDVLFNASFLDH
BO33923.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34185-PA | 126 | CG34185-PA | 1..126 | 1..126 | 662 | 100 | Plus |