Clone BO33923 Report

Search the DGRC for BO33923

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:339
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCG34185-RA
Protein status:BO33923.pep: Imported from assembly
Sequenced Size:412

Clone Sequence Records

BO33923.complete Sequence

412 bp assembled on 2013-04-19

GenBank Submission: KX797608

> BO33923.complete
GAAGTTATCAGTCGACATGAACCAGTTAACCTTTGTATGCTGCCTTTTGT
TGTGGTCCGGGTCTCAGGCTGCGTTCCAGGACTTTGTGATTGGACCTGAA
TCCTATGAAGGTGGTAACGATGTCGTCCCGTTTGGTCAAGAATTATCGGA
TGAGGTGGATGAGGATATAATGGTGTCATTCCAGGATGTACAGCATGATG
GAATAGTGGATACCAATCTACTGATGAAAGCTATAATGCAGCATGCCAAA
CGTTTGGGCATGAGCCTGGATGAACTTGCTAGCTTAAATGTGCAGTCAGA
AGATGAGGAATCTATGAACCAACTTGGGTGCTCAGCTGAGCAAGACGTCT
TCGGATACCCAGAAAAGCCCACTTGGCGGGACGTACTCTTTAACGCAAGC
TTTCTAGACCAT

BO33923.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG34185-RA 381 CG34185-PA 1..378 17..394 1890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:20:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG34185-RA 450 CG34185-RA 63..440 17..394 1890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14374014..14374191 278..101 890 100 Minus
2R 25286936 2R 14373839..14373955 394..278 585 100 Minus
2R 25286936 2R 14374250..14374333 100..17 420 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:20:37 has no hits.

BO33923.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:33:03 Download gff for BO33923.complete
Subject Subject Range Query Range Percent Splice Strand
CG34185-RA 1..378 17..396 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:07 Download gff for BO33923.complete
Subject Subject Range Query Range Percent Splice Strand
CG34185-RA 63..440 17..396 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:32 Download gff for BO33923.complete
Subject Subject Range Query Range Percent Splice Strand
CG34185-RA 63..440 17..396 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:32 Download gff for BO33923.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14373836..14373954 279..396 98 <- Minus
2R 14374014..14374191 101..278 100 <- Minus
2R 14374250..14374333 17..100 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:07 Download gff for BO33923.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10261341..10261459 279..396 98 <- Minus
arm_2R 10261519..10261696 101..278 100 <- Minus
arm_2R 10261755..10261838 17..100 100   Minus

BO33923.pep Sequence

Translation from 16 to 412

> BO33923.pep
MNQLTFVCCLLLWSGSQAAFQDFVIGPESYEGGNDVVPFGQELSDEVDED
IMVSFQDVQHDGIVDTNLLMKAIMQHAKRLGMSLDELASLNVQSEDEESM
NQLGCSAEQDVFGYPEKPTWRDVLFNASFLDH

BO33923.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG34185-PA 126 CG34185-PA 1..126 1..126 662 100 Plus