BO33925.complete Sequence
985 bp assembled on 2013-04-22
GenBank Submission: KX797939
> BO33925.complete
GAAGTTATCAGTCGACATGAGTGGAAGTTCTCCCAATTCCATAAGGCCTC
TGCCGCCGGGTCTGCAAAAAGTGGCCATCGAAGAGCTGAACGAAGTGCCA
AGTCGTGTGGAATCGGACATTGCTGCTCTGAAAGAATGGCTACAGAAGCA
GCCCCATCTCTGCGCCTGTCTCGAGGATCAGTTCCTGCTTAGTTTTCTTA
GGGGATCGAAGTTTAGTCTGGAGAAGGCCAAGCAGAAGATTGATCGATTC
TATAGCCTGCAAGCGGTCATTCCGGAGGTTTTCAACGATCAGCGATTGGT
TGACAATGCCCAGGTGTTGGAAATTATTCGACTGGGAGTGATCTTGCGCA
TTCCCCTCGATGAGGAGGATACTGGACCAGCCGTGACTATTATTCGAGCT
GGCTCCTACGACATCAATAAATTCAAGTTCCAGGACATCATACGTGTGGG
CTCCATGTTCGGTGAGATCATGATGCTGGAGGATGACAATGCCTCCGTCA
GTGGCTACCTGGAGATCATGGACATGAGTGGAGTGACGGGTGCAAATCTG
TTTGCCCTCCAACCCCAACTTCTCAGCAAATTCTCGGCCTATGCGGACGA
GGCTATGCCAACGCGTCAGAAGGGAATCCATTTCATCAATGTGCCCAAGG
CATTCGAGACGGGTTTTAAATCACTGCTTGGATGGTTTCCGGGAAAAATC
AAGGAGAGGGTTTCCGTTAGCTCCGATCCGGAAGCTATTTTCGAGCGAGT
TCCTAAGCACTATCTTCCTGAGGAGTACGGTGGCTCAAAGGGCACCATGA
AGGATATCACCGACCAGATGGAGGCAAAGCTCTGTAGCTATCGCAGCTAC
TTTGAGGACTGTCAGCATTTCGGAGCCCATGACAAGTTGCGCGAGGAAGC
CTCAGTGCTGAACCCAGACGAGAGTCACTTTGGCGTGGATGGCTCTTTTC
GCCAGTTGGTCATCGACGCAAGCTTTCTAGACCAT
BO33925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:30:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33965-RA | 954 | CG33965-PA | 1..951 | 17..967 | 4755 | 100 | Plus |
| CG31636-RB | 942 | CG31636-PB | 84..611 | 115..642 | 660 | 75 | Plus |
| CG31636-RA | 942 | CG31636-PA | 84..611 | 115..642 | 660 | 75 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33965-RA | 1026 | CG33965-RA | 23..973 | 17..967 | 4755 | 100 | Plus |
| CG31636-RB | 1567 | CG31636-RB | 498..1025 | 115..642 | 660 | 75 | Plus |
| CG31636-RA | 1294 | CG31636-RA | 225..752 | 115..642 | 660 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:29:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1233276..1233651 | 336..711 | 1880 | 100 | Plus |
| 3L | 28110227 | 3L | 1232904..1233223 | 17..336 | 1600 | 100 | Plus |
| 3L | 28110227 | 3L | 1233704..1233962 | 709..967 | 1295 | 100 | Plus |
| 2L | 23513712 | 2L | 6657070..6657329 | 642..383 | 505 | 79.6 | Minus |
| 2L | 23513712 | 2L | 6657449..6657655 | 321..115 | 195 | 72.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:30:03 has no hits.
BO33925.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 16:48:10 Download gff for
BO33925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33965-RA | 1..951 | 17..969 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:20 Download gff for
BO33925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33965-RA | 23..973 | 17..969 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:54 Download gff for
BO33925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33965-RA | 23..973 | 17..969 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:54 Download gff for
BO33925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1232904..1233223 | 17..336 | 100 | -> | Plus |
| 3L | 1233277..1233649 | 337..709 | 100 | -> | Plus |
| 3L | 1233705..1233962 | 710..969 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:20 Download gff for
BO33925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1232904..1233223 | 17..336 | 100 | -> | Plus |
| arm_3L | 1233277..1233649 | 337..709 | 100 | -> | Plus |
| arm_3L | 1233705..1233962 | 710..969 | 99 | | Plus |
BO33925.pep Sequence
Translation from 16 to 985
> BO33925.pep
MSGSSPNSIRPLPPGLQKVAIEELNEVPSRVESDIAALKEWLQKQPHLCA
CLEDQFLLSFLRGSKFSLEKAKQKIDRFYSLQAVIPEVFNDQRLVDNAQV
LEIIRLGVILRIPLDEEDTGPAVTIIRAGSYDINKFKFQDIIRVGSMFGE
IMMLEDDNASVSGYLEIMDMSGVTGANLFALQPQLLSKFSAYADEAMPTR
QKGIHFINVPKAFETGFKSLLGWFPGKIKERVSVSSDPEAIFERVPKHYL
PEEYGGSKGTMKDITDQMEAKLCSYRSYFEDCQHFGAHDKLREEASVLNP
DESHFGVDGSFRQLVIDASFLDH
BO33925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33965-PA | 317 | CG33965-PA | 1..317 | 1..317 | 1633 | 100 | Plus |
| CG31636-PB | 313 | CG31636-PB | 2..313 | 7..317 | 1088 | 67.3 | Plus |
| CG31636-PA | 313 | CG31636-PA | 2..313 | 7..317 | 1088 | 67.3 | Plus |
| CG33966-PA | 310 | CG33966-PA | 3..310 | 8..317 | 671 | 43.4 | Plus |
| CG12926-PA | 313 | CG12926-PA | 1..313 | 1..317 | 660 | 42 | Plus |
