BO33935.complete Sequence
463 bp assembled on 2013-04-19
GenBank Submission: KX796435
> BO33935.complete
GAAGTTATCAGTCGACATGAAAGGACTGCTACTCATTACAATCGCCTGCT
TGACGACCTCCATCCTGGCAGCTCCTGCTCCTGAACCCGCTCCAGAACCA
TCTCCGTCTCCAGCTCCTGCTCCATCTCCATCACCCAGCATTGGAATCGG
AATTGGTCATGGCTACGGTGGATATGGCCTGGGATTGGGTCTAGGAATCG
GGCACTACGGAGGACTCTACGGGCACGGCTATGGCGGGCACTATGGAGGT
CTTGGTCTGGGATTGGGCTACCATGCACCCATCATCTCCAAGACGATCAT
CGGCAAAAGCTACTTGGGCGGCTATGGCTATGGCCTCGGTCACGGATATC
TCGGAGGCTACGGCCATGGACTGTACGGAGGACACGGTCTGGGTCTGGGT
CTGGGTCTGGGATACGGACTGGGATATGGCTATGGCCACGGTTGGGCAAG
CTTTCTAGACCAT
BO33935.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:19:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13050-RA | 432 | CG13050-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:19:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13050-RA | 694 | CG13050-RA | 63..491 | 17..445 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:19:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16278661..16279080 | 445..26 | 2100 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 13:19:12 has no hits.
BO33935.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-19 17:16:54 Download gff for
BO33935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13050-RA | 1..429 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:29 Download gff for
BO33935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13050-RA | 63..491 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:26:05 Download gff for
BO33935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13050-RA | 63..491 | 17..447 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:26:05 Download gff for
BO33935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16278659..16279086 | 17..447 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:29 Download gff for
BO33935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16271759..16272186 | 17..447 | 98 | | Minus |
BO33935.pep Sequence
Translation from 16 to 463
> BO33935.pep
MKGLLLITIACLTTSILAAPAPEPAPEPSPSPAPAPSPSPSIGIGIGHGY
GGYGLGLGLGIGHYGGLYGHGYGGHYGGLGLGLGYHAPIISKTIIGKSYL
GGYGYGLGHGYLGGYGHGLYGGHGLGLGLGLGYGLGYGYGHGWASFLDH
BO33935.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:09:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13050-PA | 143 | CG13050-PA | 1..143 | 1..143 | 806 | 100 | Plus |
CG2157-PA | 245 | CG2157-PA | 70..171 | 43..145 | 192 | 47.2 | Plus |
CG2157-PB | 247 | CG2157-PB | 70..173 | 43..145 | 188 | 46.3 | Plus |
CG5070-PA | 209 | CG5070-PA | 47..197 | 43..145 | 182 | 37.3 | Plus |
CG15597-PB | 149 | CG15597-PB | 28..128 | 56..145 | 177 | 47.6 | Plus |