BO33937.complete Sequence
1231 bp assembled on 2013-04-22
GenBank Submission: KX795301
> BO33937.complete
GAAGTTATCAGTCGACATGGACAGTTCGTACTGGGAGAATCTGCTGCTGA
CCATCAATCGGTTCCTGGGCGTGTATCCCAGTGGGAGAGTGGGCGTACTC
CGCTGGCTCCACACGCTCTGGAGCCTGTTCCTGCTTATGTACATCTGGAC
TGGCAGCATTGTTAAGTGCTTGGAGTTCACAGTGGAGATACCCACTATTG
AAAAACTGCTCTATCTGATGGAGTTCCCTGGAAATATGGCCACCATTGCC
ATCCTGGTATACTATGCCGTATTGAACCGTCCACTTGCTCACGGAGCGGA
ACTCCAGATTGAGCGGATCATCACAGGACTCAAAGGCAAAGCTAAGCGAC
TGGTTTATAAGAGACATGGTCAGAGGACTCTTCATCTGATGGCGACCACT
TTAGTCTTCCATGGCCTGTGTGTCCTGGTTGACGTGGTCAACTATGACTT
CGAGTTCTGGACCACTTGGAGCAGTAACAGTGTCTACAATTTGCCTGGTC
TAATGATGAGTCTGGGGGTGCTCCAGTATGCCCAGCCCGTCCATTTCCTA
TGGCTGGTGATGGACCAGATGAGGATGTGTCTCAAGGAGCTGAAGTTGCT
GCAGAGACCACCGCAGGGTTCGACCAAGTTGGATGCCTGCTACGAGTCCG
CCTTTGCTGTCCTAGTAGATGCGGGTGGAGGATCTGCTCTGATGATTGAA
GAGATGAGATACACCTGCAATCTTATCGAGCAGGTCCACAGCCAGTTTCT
ACTGAGATTTGGTCTCTATCTGGTGTTAAACCTGCTCAATTCCTTGGTCA
GCATCTGTGTGGAGTTATACTTGATCTTCAACTTCTTTGAGACTCCTCTC
TGGGAGGAGTCCGTGCTCCTCGTATACCGCCTGCTCTGGTTGGCCATGCA
TGGCGGTCGTATCTGGTTCATCCTGTCGGTCAACGAACAGATCCTGGAGC
AGAAATGTAACCTTTGCCAGCTGCTCAACGAGTTGGAGGTCTGCAGCTCC
CGCCTGCAGAGGACCATTAATCGCTTCCTGCTGCAGCTCCAGCGGAGTAT
TGACCAGCCCCTGGAAGCCTGCGGAATCGTTACGCTGGACACTCGCTCAT
TGGGCGGGTTTATCGGCGTCCTGATGGCCATTGTCATTTTCCTCATTCAA
ATCGGACTGGGCAATAAGTCGCTAATGGGCGTTGCCCTCAACAGATCCAA
TTGGGTTTACGTTGCAAGCTTTCTAGACCAT
BO33937.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:30:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr59e-RA | 1200 | CG33151-PA | 1..1197 | 17..1213 | 5985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:30:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr59e-RA | 1200 | CG33151-RA | 1..1197 | 17..1213 | 5985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:30:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23541444..23542379 | 952..17 | 4680 | 100 | Minus |
| 2R | 25286936 | 2R | 23541222..23541380 | 1108..950 | 795 | 100 | Minus |
| 2R | 25286936 | 2R | 23541057..23541162 | 1213..1108 | 530 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 13:30:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-C | 11124 | TART-C TARTC 11124bp | 5725..5812 | 841..756 | 120 | 61.4 | Minus |
BO33937.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-22 16:48:14 Download gff for
BO33937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr59e-RA | 1..1197 | 17..1215 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:21 Download gff for
BO33937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr59e-RA | 1..1197 | 17..1215 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:28:56 Download gff for
BO33937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gr59e-RA | 1..1197 | 17..1215 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:28:56 Download gff for
BO33937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23541054..23541161 | 1109..1215 | 98 | <- | Minus |
| 2R | 23541222..23541377 | 953..1108 | 100 | <- | Minus |
| 2R | 23541444..23542379 | 17..952 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:21 Download gff for
BO33937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19428577..19428684 | 1109..1215 | 98 | <- | Minus |
| arm_2R | 19428745..19428900 | 953..1108 | 100 | <- | Minus |
| arm_2R | 19428967..19429902 | 17..952 | 100 | | Minus |
BO33937.pep Sequence
Translation from 16 to 1231
> BO33937.pep
MDSSYWENLLLTINRFLGVYPSGRVGVLRWLHTLWSLFLLMYIWTGSIVK
CLEFTVEIPTIEKLLYLMEFPGNMATIAILVYYAVLNRPLAHGAELQIER
IITGLKGKAKRLVYKRHGQRTLHLMATTLVFHGLCVLVDVVNYDFEFWTT
WSSNSVYNLPGLMMSLGVLQYAQPVHFLWLVMDQMRMCLKELKLLQRPPQ
GSTKLDACYESAFAVLVDAGGGSALMIEEMRYTCNLIEQVHSQFLLRFGL
YLVLNLLNSLVSICVELYLIFNFFETPLWEESVLLVYRLLWLAMHGGRIW
FILSVNEQILEQKCNLCQLLNELEVCSSRLQRTINRFLLQLQRSIDQPLE
ACGIVTLDTRSLGGFIGVLMAIVIFLIQIGLGNKSLMGVALNRSNWVYVA
SFLDH
BO33937.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:13:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gr59e-PA | 399 | CG33151-PA | 1..399 | 1..399 | 2076 | 100 | Plus |
| Gr59f-PA | 406 | CG33150-PA | 259..394 | 241..386 | 159 | 28.8 | Plus |
